Strain | Pseudomonas stutzeri MF28 contig22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCCGCGCAGCTGGCTCGATTCGATCAGTTGCTGGGGCTCGACGAAGGACCTGTGGTGGCCTACGACGATCCGCGGCGCGCAGTCGGCAAGCGGGTCC GGATTGAGGAAGGCCGCATCGTTGCTTTGAGCCTTTCCGGCGAGACCGCCGCGCGCCAGTGGCTGAAGACGCTCTGGCAGGACGGCAAGGCCGACGCAGC CCTGCGCCGCTGGATGCTCGCACCGCTGAGCACACCGCCCGGTGGCAGCGAGTTCAAGACCGGCAAGACGCTGTGCAACTGCATGAACGTCAGTCAGGAG GCAATCTGTGCCGGCATCGACCGGGGGCTGGACCTGAATGGCTTGAAGAAAGAACTGGGCTGCGGCACCAGCTGCGGCTCCTGCGTACCGGAAATCAAGC GACTGCTGGTGAAAACGCCGGCGGTGGCTTGACGCAACAATTGCACAGGCGGTGCAGCACGCATCGTCGACACGATCACAGCAGCACGAGAGGTGAAAAC
|
|
DNA Sequence for Gene |
>L686_12705
ATGAGCGCAAAAGTCTGGCTGGTTGGCGCAGGTCCTGGTGACCCGGAACTGCTGACGCTCAAGGCCGTGCGCGCCATGGGCGAGGCGCAGGTGGTGCTGA TTGACGATCTGGTCAATCCAGCCGTCCTCGAACATTGCCCGACGGCACGGGTGATCCCGGTGGGCAAGCGCGGCGGCTGCCGTTCGACGCCACAGGCTTT CATCCATCGGCTGATGTTGCGCTACGCCCGTCAGGGTAAATGCGTGGTGCGCCTGAAAGGCGGCGATCCATGCATCTTCGGCCGCGGCGGCGAAGAATCC GAATGGCTGGCCGAGCGCGGCATCGAAGTGGAGATGGTCAACGGCATCACCGCCGGGCTGGCGGGCGCCACCCAGTGTGGGATATCCCTGACCCAGCGCG GCATTGCCCGCGGCGTGACGCTGGTCACCGCGCATACGCTCGACGGCAGCAGCCCCGAGTGGCATGCGCTGGCGAAGACCGGCACGACACTGGTCGTGTA TATGGGGGTGAGCAGCTTGCAGCAGGTGCAGAACGGCCTGATCGATGGCGGCCTGCCGGCGAGCACGCCGGTGGCCATGATCGAAAACGCGTCCCTGCCG CAGCAGCGCGAATGCCGCTCCAACCTCGCCGCCCTGTGCGACGACGCGGCACGCTTCCAGCTCAAGAGTCCGGCGATCCTGGTGATCGGTGAAGTGGCCG CGACACAGGGGACTTATGGCGACGGTCGTGTGGAGCAGCCCAACGGCCATGCGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCCGACGCACCTGCAATCGGCATCAGACGCTTGCAGGTGTCTGATCGTTCTCGGTAGGCCGGTCTAGAGCATTACCGGTCATTCCCCTCGCTTCAGGCCG AACGGGGCCGGCCGACAAAAATATTTCAATAAGTTTCATCAGAAACATGTACGCGCACTTTATATGGGCATAGTATGTGCACCCATCACAAGGTTGCGAC GCTTGGCCGCAGCTGCAATAAAGCCGTTCCTCCAGGGAGTCCGGCATGTCTGATGTCACTCTGTCCCACAACTGGGGCTTCGCTGTATTTCTTCTCGGCG TCATCGCGCTGTGCGCGTTCATGCTCGGCGCTTCCAGCCTGCTCGGCAGTAAGGCTTGGGGTCGCGCCAAGAACGAACCTTTCGAGTCCGGCATATTGCC CACGGGCAGTGCGCGACTGCGTTTTTCTGCAAAATTCTATCTGGTCGCGATGCTCTTCGTGATCTTCGACGTTGAAGCCCTATATCTCTTTGCCTGGGCT
|
|
Amino Acid Sequence |
>uroporphyrin-III C-methyltransferase
MSAKVWLVGAGPGDPELLTLKAVRAMGEAQVVLIDDLVNPAVLEHCPTARVIPVGKRGGCRSTPQAFIHRLMLRYARQGKCVVRLKGGDPCIFGRGGEES EWLAERGIEVEMVNGITAGLAGATQCGISLTQRGIARGVTLVTAHTLDGSSPEWHALAKTGTTLVVYMGVSSLQQVQNGLIDGGLPASTPVAMIENASLP QQRECRSNLAALCDDAARFQLKSPAILVIGEVAATQGTYGDGRVEQPNGHAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|