Pseudomonas stutzeri MF28, L686_01005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCACGATGAGCTAACCGTTGCGCTCGTGGATATCGGCGCGACCATGACGACCCTGAGCGTGCTGCACAATGGCCGAACTATCTATACACGTGAGCAGC TCTTCGGGGGGCGGCAGCTAACCGAGGAGATTCAGCGGCGCTACGGTCTTTCGATGGAAGAGGCCGGCCTGGCGAAAAAGCAGGGAGGCCTCCCAGACGA CTACGACAGCGAAGTGTTGCAACCGTTCAAAGAAGCGGTGGTGCAGCAAGTATCGCGTTCGTTGCAGTTTTTCTTCGCCGCCGGCCAGTTCCACGACGTG GATTACATCCTCTTGGCTGGTGGGACGGCTTCGATACAGGGGCTGGATCGGTTGATCCAGCAGAAAATCGGAACCCAGACTTTAGTTGCCAACCCGTTTG CCGATATGGCCTTGAGTAGCAAGGTCAACGCTGGTGCACTCGCCAGCGACGCGCCGTCCCTGATGATCGCCTGTGGGTTGGCCTTGAGGAGTTTCGACTG
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| DNA Sequence for Gene |
>L686_01005
ATGGCCCGGATCAACCTTTTACCTTGGCGCGAACAGCTCCGGGAGGAGCGCAAGCAGCGCTTCCTGGTCTCGCTCGTCGGAGTCGCAGTCATCGCGGTGG GCCTGCTGTTTCTCGCCGACCAATACTTCACTCATGCCATCGAGCAGCAGAACGCCCGAAACGAATTCATTCGCAAAGAAATTGCTGTACTGGATGCGCG CATCGTCGAAATCAAGGAGCTGCGTGAGCGTCGCCAGCAACTACTCGAGCGGATGAAGATCATTCAGGACCTGCAGGGTAATCGGCCGATTATCGCTCGG GTGTTCGATCAGCTGGTTCGTACGCTTCCGGATGGCGTGTATTTCACCGGGCTGAAAATGACTGGCAAGAGCATCGCCATCGTAGGCGGCGCTGAGTCCA ATAACCGGGTCTCTAACCTGATGCGCAACTTGGATGGTTCTGAATGGCTGGAAGCGCCAAACCTGAACGAAGTGAAGGCCGTTACTGCGGGCGCGGTCGA CCAGGAAAACGTATTCCAGCTGACGGTGCAGCAAACGCAACCGGGCAGTGGTACAGAAGGAGGTAAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCTGGCTAGCTCCTTGGAGAGCCTACGCAGCGTCGACCTGAGCGACCTGGACATGAACAATCTGGGCTCATGGCCCGCTGCAGTGAAGGTGATCGCCGC GCTGTTGCTGATGGCGCTGATGCTGGGTGGCGGTTACTACTTCTATCTCAGCGATATGCAGGACAGCCTGGATCAGCAAAAGGCGCAGGAAGAAACGCTA AAGCAACAATTCTCCTCGAAGGCCTTTCAAGCGGCCAACCTGGAAGCATACAAAGAGCAGATGGTCGAAATGGAGGCGTCATTCGGTGCACTGCTGCGTC AGCTGCCCAGCGATACCGAAGTGCCCGGCCTGCTTGAGGACATCACTCGCACGGGCCTTGGAAGCGGGCTCGAGTTTGAAGAGATCAAGCTACAGCCAGA AGTCACTCAGCAGTTCTATATCGAGCTGCCTATCCAGATCAAAGTGGTCGGTGGTTATCACGACCTGGCGACTTTCGTAAGCGGTGTATCCAGCCTGCCA
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| Amino Acid Sequence |
>pilus assembly protein PilN
MARINLLPWREQLREERKQRFLVSLVGVAVIAVGLLFLADQYFTHAIEQQNARNEFIRKEIAVLDARIVEIKELRERRQQLLERMKIIQDLQGNRPIIAR VFDQLVRTLPDGVYFTGLKMTGKSIAIVGGAESNNRVSNLMRNLDGSEWLEAPNLNEVKAVTAGAVDQENVFQLTVQQTQPGSGTEGGKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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