Strain | Pseudomonas stutzeri MF28 contig10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACCGGAACAGCGAAAGACGCCTCGGGACTCAAAGCCAAACCAGGGCTGGGCCGGGTGCTCAAGGCTGCCGGCTATTCACTGGCCGGCCTTGCTGCAGCT TGGCGACACGAAGCCGCTTTTCGTCAACTGTCTTGCATGGCCTTGCTGCTGATTCCAGCTGCCTTTTTCGTGACGGCCGTGCCCGTCGAACGGGCGCTGC TGATCCTGCCGGTTCTGATGTCGCTCGCCCTGGAGCTAGTGAATTCGGCCATAGAGGCAGTGGTCGACCGCGTGTCTCTGGATATCCACCCGCTCTCCAA GCGCGCCAAGGATATGGGCAGCGCGGCACAGCTGGTGGGACTGTGCGCCATCGCGATCATCTGGCTCGCGATCCTGCTCTGATGCCACGCCTCGGCGGAG CGGCGACTGCCCTGCGGCGAAAAATCTGCTAACAATGGCTGACACATGCGCCTGCACCGCAGCGCGCATAATGCACCGACGATTTTTCCGGGGAGTTCCC
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DNA Sequence for Gene |
>L686_07980
ATGAGCAGCACCGCGCCCGCCAATGAAGGCGAGAAGATCCTGATTGTCGATGACGATGCGCGGCTGCGTCGTCTGCTCGAGCGGTTTCTTGATGAGCAGG GCTACCGCGTGCGTACCGTGGAAAGCGCCGAGCAGATGGACCGCGTGCTCAGCCGGGAGCTGTTCCATCTGGTGGTGCTGGACCTGATGATGCCGGGCGA GGATGGCCTTTCCGCCTGCGCGCGTTTGCGTGGGGCCGGCAACCAGATCCCCATCATCATGCTCACCGCCAAGGGCGACGAGGCCAGCCGCATTCATGGC CTGGAGCAGGGCGCCGACGATTACCTGGCCAAACCGTTCAACCCGCGCGAGCTGCTGGCGCGGATCAGGGCGGTCCTGCGTCGGCAGGCACCGCAGGTAC CGGGTGCGCCGGGCAGCGAGGACGAGACAGTTACCTTCGGTGACTACGAACTGTTCCTCGGCACTCGCGAGCTGAAGAAGGGCGACCAGGTGCATATGCT CACCACCGGCGAGTTCGCCGTTCTCAAGGCCCTGGTGCAGCATGCCCGCGAGCCGCTGACCCGCGACAAGCTGATGAACCTGGCGCGTGGCCGCGAGTGG GACGCGCTGGAGCGCTCCATCGACGTGCAGATCTCCCGCCTGCGTCGCCTGATCGAGCCCGATCCGTCGAAGCCGCGCTACATCCAGACGGTCTGGGGCG TGGGCTACGTGTTCGTGCCTGATGGCAACAAGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAGCCGATCAAAGCGCTGGAGGCCTGAGGCTGAACGATGGCGCTTTTCCGTCCAGCCTCAAGCCTGTAGCGTTCTTGTCGGCTTTTATTTATGAAAACC CCGCTCTGGTTCCCGCAAAGCTTTTTCGCACGCACCCTGTGGATGGTGCTGATCGTCGTGCTGTTCTCCAAGGTACTGATGCTGGTGTACCTGATGATGA ACGAAGACGTCATGGTCGATCGCCAGTACAGCCACGGTGCGGCGTTGACCCTGCGCGCCTACTGGGCGGCCGACGAGCAAAGCCGCGAGCGTATCGCCGA GGCGGCCGGGGTGCGGCGGGTCGTCGAGGACGAGGTGCCGCCCAGCGAATACCACTGGCCGTACACCGAGATCTTCCAGCGCCAGATGCAGCTCGAGCTG GGTGCAGATACCGAGGTGCGGGTGCGCATCCAGCCACAGACGGCGATCTGGGTGCGGGCGCCGAGCCTGGGACCGGACTGGTTGCAGGTCCCCCTGTATG
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Amino Acid Sequence |
>chemotaxis protein CheY
MSSTAPANEGEKILIVDDDARLRRLLERFLDEQGYRVRTVESAEQMDRVLSRELFHLVVLDLMMPGEDGLSACARLRGAGNQIPIIMLTAKGDEASRIHG LEQGADDYLAKPFNPRELLARIRAVLRRQAPQVPGAPGSEDETVTFGDYELFLGTRELKKGDQVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGNKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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