Strain | Pseudomonas stutzeri MF28 contig10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTGCGCATCAGGATGACGTCGAGCTCGGCCAGCGGCTTGTCGGTTTCTTCCCCTGTCTCGTACCAATGTTCGGGGTCGTTGAAGACGGTGAGCGGGCGC ATGCGGGCACGCGCCTCGCCACCGAGCTGGTAAAGGTCGCGCTGCTCCATATAGTAGATCGTCCAGTTGCGGGCTTGCGCTGCCAGCAACATGGCCAGCG AGCTGTCCTTCTTGAAGGCGATCTGCGCGATTGGGTCCATGATGATCCCGACGCGAACGGTCATGTGATGATCTCCAACGAACGGCAGAACGGAGCTGCC GGGGCCTTGAAATGTCGACGCAGATTGGCGGCGGTTGTGCGTTGGGTCAAGGAAAATCCCGCTGCTCCGGCGGCAGATGGCTTGCTTTTGAGGAGTGTGC TAAAAAGGTCCGGCGATTGGGTGCAGCCCATCGATGGCAGGGCCTCTGGCGCACTGACATAACGATAAACTACGACTCACCGAGGCGATGGTAGGGCGAA
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DNA Sequence for Gene |
>L686_06915
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTACTGAAAAAAGTAGGTTGTGATG TGATCACGGCGGTGGATGGCTTCGATGCGCTCGCCAAGATTGCCGATAGTCACCCGCGCATCATTTTCGTCGATATCATGATGCCCCGGCTGGATGGTTA TCAGACCTGCGCGTTGATCAAGAACAACAGCTCGTTCAAATCCACTCCGGTCATCATGCTGTCTTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGT ATCGTGGGGTCTGATCAATACCTCACCAAGCCTTTCAGCAAAGAAGAGTTGCTCGGTGCCATCAAGGCCCACGTGCCTGATTTCGCACCGGTAGAGCAAG TATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGTTCGGCCCTGTGTGCCGCTGAAGCCTTTCCCACGGAGAAACCATGGCTCGCGTTCTGATTGTTGATGACTCGCCGACCGAGATGTACAAGCTGACAGC CATGCTCGAAAAGCATGGTCATGTCGTTCTGAAGGCCGAAAACGGTGCCGACGGTGTAGCGCTGGCTCGCCAGGAAAAACCTGACGCCGTATTGATGGAT ATCGTCATGCCGGGCCTGAATGGCTTTCAGGCCACTCGCCAGCTGACCAAAGATGCTGAAACCAGTCACATTCCGGTGATCATTGTGACGACCAAGGACC AGGAAACCGATAAGGTCTGGGGCAAGCGCCAGGGCGCCAAGGATTACCTGACCAAGCCGGTCGATGAAGCGACACTGCTGAAGACCCTGAACGCCGTGCT TGCCGGCTAATAGGCGGTTTCGTAATTCGGACAAGGGATGTTGCGACATGTCGGATTCGCCTACGCCGTTTCAGCGACTCCTGGAGATCGATAGCCGCTG
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Amino Acid Sequence |
>pilus response regulator PilG
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADSHPRIIFVDIMMPRLDGYQTCALIKNNSSFKSTPVIMLSSKDGLFDKAKGR IVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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