Pseudomonas stutzeri MF28, L686_00125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGATTCGCGCCTTCGTACCCTACAAGGAGTCCAAGGGTGAGGAGTACATGAGCGACAATATGCGCGCTCATTTCACCGGCATCCTCAACAAGTGGAAACA GGAGTTGATGGAAGAAGTCGATCGCACTGTGCACCACATGCAGGACGAAGCGGCCAACTTCCCGGATCCAGCCGACCGCGCCAGCCAGGAAGAAGAATTC AGCCTGGAACTGCGTGCTCGCGATCGTGAACGCAAGCTGATCAAGAAGATTGACGAAACGCTGCAGTTGATCGAGGACAACGAATACGGCTGGTGTGATT CCTGCGGCGTCGAAATCGGCATCCGTCGCCTGGAAGCCCGCCCCACCGCCACGCTGTGCATCGATTGCAAGACGCTGGCGGAGATCAAGGAAAAGCAGAT CGGTTCCTGATCCCGAACGGGGCGCTACGGCGCCCCGCTTCATTTCTGTCTGCACCTTACCAATCGCCCGCCTCGCCGCAACCTTCCGAGCCGGTCCGTC
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| DNA Sequence for Gene |
>L686_00125
ATGCCCCCTTCCGTTACCAAGCCTGCAGCCTACGTCGGTCGTTTTGCACCGACCCCCAGCGGTTATTTGCATTTCGGTTCTCTCATCGCGGCCCTGGCCT CCTTTCTCGATGCGCGCGCGGTCGGCGGCCGCTGGCTGCTGCGCATGGAGGACCTCGACCCACCACGCGAAATGCCCGGCGCGCAGGACGCCATCGTCCA GGCACTGGAGGCCTACGGCTTCGAGTGGGACGGCCCGATGGAACGCCAGAGCGATCGACTGGACGTCTATAACGCAGTAATCGAGCAACTCTGGCAGGAT GGCCACATCTATGCCTGTACCTGCTCTCGAAAACAGCTGCAACCCTTCGCCGGCCGGTATCCCGGGCTCTGCCGGAACGCCCGGCACGAGCCGATGGATG CGGCCATTCGCCTGCGGGTTCCAGACGAAGAATATGGCTTCGTCGACCGGGTACAGGGTGCGTTCTCCCAGCGGCTGCGTCGGGACGTCGGGGATTTCGT CATCCGTAGGCGCGATGGGCTCATCGCCTACCAGTTGGCCGTCGTGCTCGACGATGCCTGGCAGGGCGTGACCGACATCGTCCGTGGCGCCGACCTGCTC GACTCCACCCCGCGCCAGCTCTATCTGCAGGATCTGCTCGGGCTACCTCGGCCGCGTTACCTGCACGTACCGCTGATCATTCAGCCCGACGGCCATAAAT TGGGCAAACGTTACCGCTCGCCACCGCTGCGGCCTGCGGAGGCGACGCCGCTGTTGCTTCGGGCGCTACGCGCCCTCGGCCAGCCAACTCCCGACGAGCT GAACGACGCGCTACCCAAGGAGGTTCTGGCCTGGTCGATCCCGCGTTGGGATGCCGAGCGGATCCCGCGCTGCCCGACCCTGGCCGAGGCGCAGTTGCGC TAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAAAGACAAAGCCGATAAATACCCTGAAGGCTGGATGAAGCTTGACGCCTCGAGCCTCGAGCCCTCGCTTCTCCTTGCCGGTTGTGGCCTGCCGCCTGGC GCTGCTTTACCATTCCGCTACTTCCGACACGAGTTCCAGCATGTATATCTACCGACTGGTGCTGCTCCTGGTGGTGGGGATCTACCTGTTTTCCCCCGCG ATCATGGACTGGTGGATCGACCCCAACGGTGCCTGGTATCGCCCCTACCTGTTGTGGCTGATCCTCATCGTGGTGACCTTCATCCTTCAGAGTCAGCGCG ATGCAGACGAGCTTTAGCCTCAGCCACCTGATCCTCATCAGCGTCGCCTACCTGCTGGTGCTGTTCGGGGTGGCCTGGGTCAGCGAGCGCGGGCTGATCC CGCGCTGGGTGATCCGTCACCCATTGACCTACACCCTGTCGCTGGGGGTTTATGCCAGTGCCTGGGCGTTCTACGGTACCGTCGGCCTGGCCTACCAATA
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MPPSVTKPAAYVGRFAPTPSGYLHFGSLIAALASFLDARAVGGRWLLRMEDLDPPREMPGAQDAIVQALEAYGFEWDGPMERQSDRLDVYNAVIEQLWQD GHIYACTCSRKQLQPFAGRYPGLCRNARHEPMDAAIRLRVPDEEYGFVDRVQGAFSQRLRRDVGDFVIRRRDGLIAYQLAVVLDDAWQGVTDIVRGADLL DSTPRQLYLQDLLGLPRPRYLHVPLIIQPDGHKLGKRYRSPPLRPAEATPLLLRALRALGQPTPDELNDALPKEVLAWSIPRWDAERIPRCPTLAEAQLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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