Pseudomonas putida LS46, PPUTLS46_025816

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig32, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATTGCGGCTGTGGGCCTGGCCCACGCGCGTGGCCAGTACCCGGCGCAGTTGTCTGGCGGCATGGCCCAGCGCACCGCGCTGGCCCGCTGCCTGGCACGC CAGCCCGAAGTCTTGCTGCTGGATGAACCCTTCGGTGCGTTGGATGAGGTGACCCGCGCCGACATGCAGCAGCTGCTGCTGCAACTGATCGCCACGCACA AGACCGCGGCCGTGCTGATCACTCACGATATCGACGAAGCCCTGCTGCTGTCAGACCGGGTTCTGCTACTGGGCAACCACCCAGCGCACATCCTTGGTCA GTGGCACATCGACCTGCCGCAACCGCGCACGCAGAGGGTCGAAGAGCTGGGGGCCTTGCGCATAGACATCCTCAAAACCCTTCGGCGGGCAAGCCGCACA GTCGAACCTACCCCAACCCCTTTGCCCTCGGAGGCTGTCCATGTGCATGGATGACTGCTGTTCTTCTTCTTCGCGTCGTGACTTCCTAAAGCTCGGCGCC
DNA Sequence for Gene
>PPUTLS46_025816
ATGCTCACTGCTGCCGGTGCATTGCCGTTGCTGTCGAGCTTGCAGGCGCGTGCCGCTGCCGAGCCGGACGCGCCGGTGCGTATCGGCTACCTGCCGATCA CCGATGCCACGCCGCTGCTGGTGGCACATAACAACGGCTTGTTCGAGGCCGAAGGCATCCAGGCCGAGCGCCCGGTGCTGCTGCGCAGCTGGGCGCAGGT GATCGAGGCATTCATTTCCGGCCAGGTCAATGTCATCCACCTGCTTTCGCCGATGACGGTGTGGGCGCGCTATGGCAGCAAGGTGCCAGCCAAGGTGGTG GCCTGGAACCACGTGGGCGGTTCGGGCCTGACTGTAGCGCCGGATATATCCGACGTGAAACAGCTTGGTGGCAAGACAGTGGCCATTCCGTTCTGGTACT CGATCCACAATGTGGTACTGCAACAGTTGCTCAACGACAATGGCCTGACGCCCGTGTCGAAGCCGGCCAATGCGCAACTGGCCGCCAACGAGGTCAACCT GCTGGTGCTGCCACCGTCCGACATGCCACCCGCACTGGCCAGCAAGCGCATTGCCGGCTACATCGTTGCCGAGCCGTTCAACGCACTGGCCGAGAACCTC AAGGTGGGCCGCGTGCAGCGCTTTACCGGCGATGTATGGCGCAACCATGCGTGCTGCGTGGTGTTCATGCACGAGCATGACCTGAATAACCGCCCGGAAT GGTCGCAGAAAGTGGTCAACGCCATCGTCAAGGCCCAGCAATGGACCCGTGACCATCGCACCGAAGCCGCCGCACTGCTGTCCCGGGCGGGCCCCAACAA GTACACCCCGCACGAGCCTGCGGTGCTGACCAAGGTCCTGGCGCCCGCCGCCGAAGACCGTGCTGGCTACATTGCCAGTGGTGCCATTCGCCATCAGCAG TGGGACGAAAAGCGCATCGACTTCCAGCCATACCCGTTCCCGAGTTACACCGAAGAGCTGGTCAAGCGCCTGAAAACCACCCTGATCGAAGGCGACAATG CCTTCCTTGCCGGGCTGGATCCGGCGTATGCCGCCCGCGACCTGGTCGACGATCGCTTCGTGCGTAATGCCATCGCGACAGTGGGTGGCCCGTCGGTGTT CGGCATTGCCGACAACTTCGAGCGTAGCGAGGAGTTTGCGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCACCCATGTCGTACATGCCGGCCTTGGGCTGGTCGGGTTGCTGGCCTTGTTGCTGTTATGGTGGGCCGGTGTAGCACTGTTCGGCCAGGCCGACGG CCTGTCGGCGCGCTTTTCGCCGGCGGCAACCCTGGCCAGCCTGGTCGAGCTGCTGGGGCAGGGCGAGGTCTATGGGCATATCTGGGTCAGCCTCAAGCGC ATCCTGATCGGGCTGCTGCTGGCGCTGCTGATGGGTGTGCCGCTGGGCTTGCTGGTAGGCAGCTACCGGCACCTGGAGGCGGCGACCACGCCAGCATTCC AGTTTCTGCGCATGATATCGCCATTGTCGTGGATGCCTGTGGTGGTGATGCTGATGGGCGTGGGTGACCAGCCGATCTACTTCCTGCTGGCGTTTGCCGC GTTGTGGCCGATCTTGCTGAATACGGCGGCAGGGGTGCGTCAACTGGACCCGCGCTGGCTGCAACTTAGCCGCAGCTTGAGTGCAACGCGCTGGGAAACC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MLTAAGALPLLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHNNGLFEAEGIQAERPVLLRSWAQVIEAFISGQVNVIHLLSPMTVWARYGSKVPAKVV AWNHVGGSGLTVAPDISDVKQLGGKTVAIPFWYSIHNVVLQQLLNDNGLTPVSKPANAQLAANEVNLLVLPPSDMPPALASKRIAGYIVAEPFNALAENL KVGRVQRFTGDVWRNHACCVVFMHEHDLNNRPEWSQKVVNAIVKAQQWTRDHRTEAAALLSRAGPNKYTPHEPAVLTKVLAPAAEDRAGYIASGAIRHQQ WDEKRIDFQPYPFPSYTEELVKRLKTTLIEGDNAFLAGLDPAYAARDLVDDRFVRNAIATVGGPSVFGIADNFERSEEFAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site