Pseudomonas putida LS46, PPUTLS46_024683

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCCGGGTGCCCAGGGTGGCCCGCTGATGCACGTGATCGCTGCCAAGGCGGTGTGCTTCAAGGAAGCGCTGGAGCCTGGATTCAAGGCCTACCAGCAGCA AGTGATCGAAAACGCCCAGGCCATGGCCCAGGTGTTCATCGACCGTGGCTACGATGTGGTTTCCGGTGGCACCGACAACCACCTGTTCCTGGTCAGCCTG ATCCGTCAGGGCCTGACTGGCAAAGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGT TCGTCACGTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCT CGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACC
DNA Sequence for Gene
>PPUTLS46_024683
ATGCAACGTTACTCGGGCTTCGGCCTTTTCAAGCACTCCCTCAGCCACCACGAAAACTGGCAGCGCATGTGGCGCACGCCAACCCCTAAAAAGGTTTACG ACGTGGTCATTGTCGGCGGTGGCGGTCATGGCCTGGCCACGGCCTACTACCTGGCCAAAGAGCACGGCATCACCAACGTTGCCGTGATCGAGAAGGGCTA CCTGGGCGGCGGCAACACCGCCCGTAACACCACCATCGTGCGTTCCAACTACCTGTGGGACGAGTCGGCGCACCTGTACGAGCACGCCATGAAGCTGTGG GAGGGCCTGTCCCAGGACCTGAACTACAACGTGATGTTCTCCCAGCGCGGCGTTTACAACCTGTGCCACACCCTGCAGGACATGCGTGACTCCGAGCGTC GGGTCAGCGCCAACCGCCTCAACGGCGTGGATGGCGAGCTGCTGAACACCGCCCAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCG CTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGCGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTC GACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGAGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCG GCGTGGTCACCGCCGGTAACTCCGGGCACATGGCCAAGCTGGCCGGCTTCCGCCTGCCGCTGGAATCGCACCCGCTGCAAGCGCTGGTATCCGAGCCGAT CAAGCCGATCATCGACAGCGTGATCATGTCCAACGCCGTGCACGGCTACATCAGCCAGTCCGACAAAGGCGACCTGGTGATCGGTGCCGGTATCGACGGC TGGGTCGGCTACGGCCAGCGCGGTTCGTACCCGGTGATCGAGCACACCCTGCAGGCCATCGTCGAGATGTTCCCCAACCTTTCGCGTGTTCGCATGAACC GCCAGTGGGGCGGCATCGTAGACACCTCGCCGGACGCCTGCCCGATCATCACCAAAACCCCGGTCAAGAACATGTTCTTCAACTGCGGTTGGGGTACTGG CGGCTTCAAGGCGACCCCCGGTTCGGGCAACGTCTTCGCCGCGAGCCTGGCCAAGGGCGAAATGCACCCACTGGCCGCGCCGTTCTCCATGGACCGTTTC TACAACGGCGCACTGATCGACGAACACGGCGCCGCCGCCGTCGCCCACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGAGACACCGTCATGTTGCATATTTTCTGTCCCCACTGCGGCGAGCTGCGCTCCGAAGAAGAGTTCCACGCCTCTGGCCAGGCACACATCGCCCGCCC GCTGGACCCTAACGCCTGCTCCGACGAGGAGTGGGGTACCTACATGTTCTACCGTGACAACCCACGCGGTATTCACCATGAACTGTGGGACCACGTTGCC GGCTGCCGCCAGTACTTCAACGTCACCCGTGACACCGTGACTTACGAAATTCTGGAAACCTACAAGATTGGCGAGAAGCCGCAAGTGACCGCCAATGGCA AAGCCGCCAGCGCCACGTCGACCGTCAAAGGCCAAGGGGAAAAAGTATGAGCCAGACCTATCGCCTCGCCAGCGGCGGCCGTATCGACCGCAGCAAGGTC CTGAACTTCACCTTCAACGGCAAGACCTACCAGGGTTATGCCGGTGACAGCCTGGCCGCCGCGTTGCTGGCCAACGGCGTCGACATCGTTGGCCGCAGCT
Amino Acid Sequence
>sarcosine oxidase subunit beta
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVIEKGYLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLW EGLSQDLNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNTAQVAAEIPYLDCSKNTRYPILGATVQRRGGVARHDAVAWGFARAADALGV DLIQQTEVIGFRKENGAVIGVETNKGFIGAKRVGVVTAGNSGHMAKLAGFRLPLESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG WVGYGQRGSYPVIEHTLQAIVEMFPNLSRVRMNRQWGGIVDTSPDACPIITKTPVKNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSMDRF YNGALIDEHGAAAVAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site