Pseudomonas putida LS46, PPUTLS46_024568

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAACCCGGCCGCGCAGCACTCGTTCATCATCACTGAAGAGCTGGCGCCGACCATCAGCCTGGAAGACTTCAGCATCGACTGGGTCAAGCAGCCGCCTG AGCCGCGCCTGAAGCGTGCACTGATCGCCGAGGTGGCGAAGATGACCGGCGGGATGCACCGCGCCGGGGTCAACCACCGTGATTGCTACATCTGCCATTT TCTGCTGCACACCGACCGACCGGTGACGGCAGATGACTTCAAACTGTCGGTGATCGACCTGCACCGCGCGCAAACCCGTGCCAGAATCAGCCGCCGCTGG CGCGACAAAGACCTGGCTGCGCTGTACTTTTCGGCCCTGGACATTGGCCTGACCCAACGCGACAAGCTGCGCTTCCTGCGCGGTTACTTCCAGCGTCCGC TGCGGCAGGTGCTGAAGGACGAAGCCGCACTGCTCGCCTGGTTGGAGCGCAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGACGCACTCTG
DNA Sequence for Gene
>PPUTLS46_024568
ATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCG ACCCGCTCAGTGAGGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGGGCG GCCACGCATCAAGGCCGAATGGCAAAACCTCAAGCAGTTCGCCAAATGGGGTATTCCCACTGCCGAAGTCGTGGCCTGGGGCCTGGAGCGCAACGGCCTG GCCTTTGGCCGTGGCGCTATGATCACCCGTGAGCTGCCGCACACCGAAGACCTGTCGGCCCTGGCCGATAACAACGATGCGCGCTTGGCCGACCGCAGCT GGGTCGACCATGTCAGCCGTCAACTGGCGCGCCATACCCGGGTCATGCACCAACACCGCTTTGCCCATAACGACCTGAAGTGGCGCAACCTGCTGGTCGA TGACCAAGGCACGCTATTCTTCATCGACTGCCCCACCGGCGACTTCTGGCGCGGTTTCATGTGGCGCCACCGGATGATCAAGGACCTGGCATGCCTGGAC AAAGTGGCCAAATACCACCTGTCAGCTACCCAGCGCCTGCGCTTCTACCTTCAATACCGTGGCCGCGACCGGCTGAATGTGCGTGACAAGAAGCGCATTC ATCGGGTACTGGGCTTTTTCGAGGGAAGGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATTACCTGGCCAGCGCGGACCTCGCGCTGCTCAAGCGCCATGGCCTGGACAACTTCGAGGCACTGTGGGCGCTGCAACTTGATGCTGTGGACGAACC CAACACCGGCCGTGGTGGCTGGAGCAGCGTCTTTCGTCTGGAACTCGAAGGCAAGGGCTACTACCTCAAGCGCCAGAGCGACTACCTGACCCGTACCTTG CACCGGCCGTTCGGCGAGCCCACCTTCGCCCGCGAATTCCGCAACATCAGTCGCTACCAGAAGCTGCGCATTCCGGCATTGCAGGCGGTGTTCTACGGCG AGCGCAAGCAGGGCGGCAAGCACCGGGCTATCCTGATGACCCGCGCTCTGGACGAATGGGCCGACCTCGACAGCCTGCTGGCGCAGTGGCCGCGGTTGGG TGAAGCCGAGCGCACTGGCATCCTGCAGGCCTGCGGTCAGCTGGCACGCACCCTGCACAGCGCCGGCCAGGTGCATGGTTGCTTCTACCCCAAGCACATT
Amino Acid Sequence
>lipopolysaccharide kinase
MASWTLAPGYEHLAADFGSLDAVFALQGERLTRDPLSEVVRIERDGINYYVKRYTGAGKHMRRYLGRPRIKAEWQNLKQFAKWGIPTAEVVAWGLERNGL AFGRGAMITRELPHTEDLSALADNNDARLADRSWVDHVSRQLARHTRVMHQHRFAHNDLKWRNLLVDDQGTLFFIDCPTGDFWRGFMWRHRMIKDLACLD KVAKYHLSATQRLRFYLQYRGRDRLNVRDKKRIHRVLGFFEGRE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site