Pseudomonas putida LS46, PPUTLS46_024233

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGAAATCCAGCAGATCGCCGACCCGCGCACGCTGTACGAAGAGCCCTGCAACACCTTCGTCGCCAACTTCATCGGCGAGAACAACCGCATCAGCGGCACC CTGCTGGCCAGTGATGGCAAACGTTGCCAGGTGCAGTTGCCTCGCGGCGAGCGGGTCGAGGCGCTGGCGGTGAATGTCGGCCAGGCCGGCGAGCCGGTGA CCCTGTCGATACGCCCGGAGCGCGTGCGCCTGAACGGCCACAGTGAAAGCTGCGTGAACCGGTTCTCTGGCCGGGTGGCCGAATTCATTTACCTGGGCGA CCACGTGCGGGTGCGTCTGGAGGTTTGCGGCAAAGGCGACTTCTTCGTGAAGCAGCCAATTGCCGAGCTCGACCCGGCGTTGGCCGTGGGCGATGTGGTA CCGCTGGGCTGGGAGGTGGAGCACGCCCGCGCGCTCGATCCGATTGCCGAAGCCCATTGATGGATTGCTTCACCAACCCTGTACTGTGGAGAGAATAATA
DNA Sequence for Gene
>PPUTLS46_024233
ATGCGCAAGCAGTTTAAACTGACCGCCCTGGCTTTGGGGCTGTTCACCGCTGGCCAGGCCATGGCCGCAGACCTCACCGTGATCTCGTTCGGGGGCGCCA ACAAGGCTGCCCAGGTCAAAGCGTTCTACGAACCCTGGGAAAAAGCGGGTAATGGCAAGATTGTCGCGGGTGAGTACAACGGCGAAATGGCCAAGGTCAA GGCGATGGTCGACACCAAGAGTGTGTCGTGGAACCTGGTAGAGGTTGAGTCGCCAGAGCTGGCGCGCGGCTGCGACGAGGGCATGTTCGAAGAGCTCGAT CCAGCCCTGTTCGGCAATGAAGCCGACTACGTGCCTGGTGCCATTCAGCCTTGCGGCGTGGGCTTCTTCGTCTGGTCCACGGTCATGGCCTACAACGCCG ACAAGCTCAAGACCGCCCCCACCAGCTGGGCCGATTTCTGGGACACCAAGCAGTTCCCGGGCAAGCGCGGCCTGCGCAAGGGCGCCAAGTACACAATGGA ATTTGCACTGATGGCCGACGGCGTTGCGCCCAAGGACGTCTACAAAGTGCTGGCAACCAAGGAAGGCCAGGACCGCGCCTTCAAGAAACTCGACGAACTC AAGCCCAGCATCCAGTGGTGGGAAGCGGGTGCACAGCCACCGCAGTTCCTGGCCTCTGGCGACGTGGTCATGAGCTCTGCCTACAACGGCCGTATTGCCG CTGTGCAGAAAGAAAGCAACCTCAAGGTGGTGTGGAACGGCGGCATCTACGACTTCGATGCATGGGCAATTCCTAAAGGCGCCAAAAACGTCGAAGAGGC GAAGAAGTTCATCGCCTACAGCGTCAAGCCCGAGCAGCAGAAGATCTACTCCGAAAACATCGCCTATGGCCCGGCCAACTCCAAGGCCGTGAGCCTGCTG TCGGACGACGTGAAGAAAGACATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGG AGCAACGCTTCAACGCCTGGGCGGCGAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTTCAA GTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGCGCCGCTGGCGCTGTTTCTTCTGCTGGTGTTCCTGGT GCCGATTGCGGCGCTGCTGTACAAGAGCGTCGGCAACCCTGAAGTGGTCGGCGGCCTGCCGCGCACGGTGGAAGTCATCAGCCAGTGGGATGGCAAAAGC CTGCCAGGCGAGGACGTTTACAAGGCGCTGAGCCAGGATTTGGCCGAGTCGCGCAAGAACCAGACCCTTGGTGACCTTTCCAAACGCTTGAACATGGAAC TGGCCGGTTACCGCAGCTTGTTGACCAAGACTGCCCGTGCACTGCCCTTCAAGGCTGAGCCTGCCTCTTATAAGGATGCGTTGCAGGCTGTCGACGAGCG
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MRKQFKLTALALGLFTAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEYNGEMAKVKAMVDTKSVSWNLVEVESPELARGCDEGMFEELD PALFGNEADYVPGAIQPCGVGFFVWSTVMAYNADKLKTAPTSWADFWDTKQFPGKRGLRKGAKYTMEFALMADGVAPKDVYKVLATKEGQDRAFKKLDEL KPSIQWWEAGAQPPQFLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYGPANSKAVSLL SDDVKKDMPTTPENIANQVQIDVAFWADNSEQLEQRFNAWAAKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site