Pseudomonas putida LS46, PPUTLS46_023443

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00267 duf1_3 IPR000160 GGDEF domain 278 449 3.5E-51
CDD cd01949 GGDEF IPR000160 GGDEF domain 291 447 5.19914E-60
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 291 444 1.5E-41
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 292 450 2.7E-50
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 286 447 8.0E-45
FunFam G3DSA:3.40.50.2300:FF:000346 Diguanylate cyclase response regulator - - 159 287 1.5E-52
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 156 290 1.42E-29
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 164 275 1.1E-19
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 119 448 3.0E-87
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 284 449 6.6E-49
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 46 154 4.7E-9
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 38 150 0.013
Gene3D G3DSA:3.40.50.2300 - - - 28 154 1.4E-8
Gene3D G3DSA:3.40.50.2300 - - - 155 291 1.6E-26
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 294 449 6.36E-47
CDD cd00156 REC - - 165 265 5.52316E-22
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 162 275 4.3E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.