Pseudomonas putida LS46, PPUTLS46_015439 (mtnA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida LS46 Contig14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGACGGGTCGGGCACGTGCTCGAGCATTTCCAGGCAGGTGACCACGTCGAACTGTTCGGGCATTTCCTCGGCCAGGGCTTCGGCGGTGATCTGCCGGTAT TCCACCTGCACGCCGGACTCCAGCTGGTGCAGCTGAGCCACCGCCAGTGGCGCCTCGCCCATGTCGATACCGGTGACCGTGGCGCCGCGCAGGGCCATGG CTTCGCTGAGGATGCCGCCACCGCAACCCACGTCCAGCACTTTCTTGCCGGCCAGGCTGACGCGCTCGTCGATCCAGTTGACGCGCAGCGGGTTGATTTC GTGCAGCGGCTTGAACTCGCTTTCGCGGTCCCACCAGCGGTGGGCCAGCGCTTCGAACTTGGCGATTTCGGCGCGGTCGACGTTGCTCATTGAACAGTCC TCTGAAACTTCGCAAAATTGCGCCGGAGTATACCCGAGCGCTTGGCCGCGAGGGTCGCTATAATCGCCGGTTTTTGATATCCGAATGACGGGGAGAGGCG
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| DNA Sequence for Gene |
>PPUTLS46_015439
|mtnA
ATGCGCGAGCGACTTTTGGCGGCGGAGAAGGTGACCGCGATCCGCTGGCAGGGCGGCGCCTTGCACCTGCTCGACCAGCGCCTGCTGCCGTCGGAGGAGC GTTGGCTGGCCTGCGACAATGTTGCGCAGGTGGCCGCAGCCATCCGTGACATGGCAGTGCGCGGCGCCTCGGCGATCGGTATTGCCGCAGCTTACGGCCT GGTACTGGCCCTTGAAGAGCGGCTGGCCGAAGGCGGCGATTGGGAAATGGAACTGGAAGACGACTTTCTCACCCTCGCCGAAGCGCGTCCTACCGCCGCC AACTTGTTCTGGGCGCTTAACCGCATGCGCGAGCGTCTGCTGCGCCTGCGTCCGGAAGAAGACGTTCTGGCGGCGCTGGAGGCCGAAGCGGTGGCCATTC ACGAAAGCGACCGTGAGGCCAACCTGACCATGGCCCAGCAGGGTATCGAGCTGATCCGTCGTCATCAGGGCAATGCCCAGGCCCTGCTCACCTTCGGCAA CGCCGGCGCCCTTGCCAGTGGCGGCTTTGGCACCGCACTGGGGGTGATCCGTGCCGGCTACCTGGAAGGCATGGTCGAGCGGGTTTATGCCGGTGAGACT CGCCCTTGGCTGCAGGGCTCGCGCCTGACGGCCTGGGAGCTGGCCAACGAGGGAATTCCGGTGACCCTGTGCGCCGACTCGGCGCTGGCGCATCTGATGA AGACCAAGGGCATCACCTGGGTGGTGGTGGGCGCGGACTGCATCGCTGCCAATGGCGACGTGGCCAGCAAGATCGGCACCTACCAGTTGGCGGTCAGCGC CATGCACCATGGTGTGCGCTTCATGGTGGTGGCGCCGAGCACCAGCATCGACCTGAGCCTGGCAACCGGCGAGGATATTCCCCTGGAAGAGCGTGACGCC GACGAGTGGCTGGACTTTGGCGGTGCCCCGGCGGTACGGGATGTGCAGGTATTCAACCCGGTGTTCGACGTGACCCCGGCCGACCTGATTGACGTTATCG TGACCGAACGGGGTGTTGTCGAGCGCCCGGATACCGCCAAACTGGCCCAGTTGATTTGCCGCAAGCGCCTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACCCCGGTAGAACGCGTACTTTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGGGATGTCGGCGAAGAAGCAAAAATTGCCGGGGC TGCTGTGCAGCCCTATCGCGACACAAGGCCGCTCCCACAATGACCGTGCACTGCCGTACAGATCTCCCCACCGCCCCCGCCTTTGTGATAATATCCGGCA GTTTCCAAGACCGCCCAAAGTGGCGGCCTTCATTGCGCAGATCCATGGCACAACTCATTGATTTGTCGTAAGTCGTCGCACCCTTATGCGCTGCGGCGGC GAGCTTCGTTCGGCCCTTGATGGAGCTGCGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATAT CGAAGACGAACTGAGACAGTCTTACCTCGACTACGCGATGAGCGTGATTGTCGGGCGAGCGCTGCCCGATGCGCGTGACGGCTTGAAGCCCGTGCATCGC
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| Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAEKVTAIRWQGGALHLLDQRLLPSEERWLACDNVAQVAAAIRDMAVRGASAIGIAAAYGLVLALEERLAEGGDWEMELEDDFLTLAEARPTAA NLFWALNRMRERLLRLRPEEDVLAALEAEAVAIHESDREANLTMAQQGIELIRRHQGNAQALLTFGNAGALASGGFGTALGVIRAGYLEGMVERVYAGET RPWLQGSRLTAWELANEGIPVTLCADSALAHLMKTKGITWVVVGADCIAANGDVASKIGTYQLAVSAMHHGVRFMVVAPSTSIDLSLATGEDIPLEERDA DEWLDFGGAPAVRDVQVFNPVFDVTPADLIDVIVTERGVVERPDTAKLAQLICRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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