Strain | Pseudomonas putida LS46 Contig13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGCGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAG AAGCCCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAATTCCAGCACGCCGCTGCACCGGGCCTGGAAAGTGAGCAACTGAGCGAGGAGGG TGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGC CATGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGTACCGCGCTCG TCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGCGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTA
|
|
DNA Sequence for Gene |
>PPUTLS46_013573
|argJ
ATGGCTGTTGGTCTTGGTCCTTTGCCCACCCTGCACCCGGTTCCGGGTTTTGAACTCGGTATCGCTTCTGCCGGTATCAAGCGCCCGGGGCGCAAGGATG TGGTGGTCATGCGCTGTGCCGAAGGCTCCAGCGTGGCTGGCGTGTTCACCCTCAACGCCTTCTGCGCAGCGCCGGTGATCCTGTCCAAGCAGCGTGTACA GGGCACCGTGCGCTATCTGCTGACCAACACGGGTAACGCCAATGCTGGCACCGGCGCGCCAGGCCTGGCCGCCGCCGAGCGCACCTGCGCCAAGCTGGCC GAACTGGCTGGCGTACCGGCAGAGTCGGTACTGCCGTTCTCCACCGGCGTGATTGGCGAGCCGCTGCCGGTCGAAAAGATCGAAGGCGCGCTGCAGGCCG CCCTCGACAACCTGTCGGAGAACAACTGGGCTGAGGCCGCTACCGGCATCATGACCACCGACACCCTGCCCAAGGGGGCCAGCCGCCAGTTCCAGCACGA TGGCGTGACCGTTACCGTCACCGGTATCAGCAAGGGTGCAGGCATGATCCGCCCGAACATGGCGACCATGCTGGGCTACATCGCCACCGACGCCAAGGTG GCGCCAAGCGTCCTCAAGGACCTGATGCTGGACGGCGCCAACAAGTCGTTCAACCGCATCACGATCGATGGTGATACTTCGACCAACGATTGCTGCATGT TGATCGCTACCGGCAAGGCCGACCTGCCGGAAGTGACTGAAGCCAGCGGCGCGCTCTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGT GGCCCAGGCCATCGTCCGTGACGGCGAAGGCGCGACCAAGTTCGTGACCGTGCAAGTCAACGGTGGTGGTAACCACCAGGAGTGTCTGGACGTCGGCTAC GCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGTATCCTCGCTGCCGTAGGCCGTGCCGGTGTACCGGAGC TGGATGTGAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATTGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGAT GGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACCGACCTGTCCCACGAGTACGTGAAGATCAAC GCCGAGTACCGTACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAGGAGCGGTGCGGTCCCTGTGGGAGCGGGCTTGCCCGCG AAAGGCCGCGCAGCGGCCTGCGGGTTTTGCAATACAAACCTGATGGAGCCGAACCATGAGCTATCACCTGATCATCGGCGACAAGCTTTACTCCTCCTGG TCGCTGCGTGGCGCCCTGGCCCTCGAGCTGGCTGGCGTGCCCTACGAAGAAACCCTGATCAAGCTGAACCAGCCTGATACCCGCCAGCGCATCCTCGCTT TCTCCTCCACCGGCAAGGTGCCGCTGCTCAAGAGCGAGCACGGTGTGATCGCTGACTCGCTGGCCATTGCCGAATACCTCAACGAACGCCACCCCGAAGC CCAGCTGTGGCCTGCCGATGTGGCGGCGCGTGCCCAGGCCCGTTCGGCCTGTGCGCAGATGCATAGCGGCTTCTTTGCCCTGCGCGGCGCCATGCCGTTC
|
|
Amino Acid Sequence |
>N-acetylglutamate synthase
MAVGLGPLPTLHPVPGFELGIASAGIKRPGRKDVVVMRCAEGSSVAGVFTLNAFCAAPVILSKQRVQGTVRYLLTNTGNANAGTGAPGLAAAERTCAKLA ELAGVPAESVLPFSTGVIGEPLPVEKIEGALQAALDNLSENNWAEAATGIMTTDTLPKGASRQFQHDGVTVTVTGISKGAGMIRPNMATMLGYIATDAKV APSVLKDLMLDGANKSFNRITIDGDTSTNDCCMLIATGKADLPEVTEASGALFEALKKAVFEVCMEVAQAIVRDGEGATKFVTVQVNGGGNHQECLDVGY AVAHSPLIKTALFASDPNWGRILAAVGRAGVPELDVSLIDVYLDSVCIASKGGRSPSYTEAQGSAVMAQEEITIRIELGRGQCSETIWTTDLSHEYVKIN AEYRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|