Pseudomonas putida LS46, PPUTLS46_013353

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTGTTGCTGTTCGGCAGCCCGGTCAGCTGGGAGGTGCCGCAGCTCAAAGGCTTCAACTTTGTCGGCGGCTGGGTGCTGATCCCCGAGTTGCTGGCGCTG ACCCTGGCGCTGACTATCTATACGGCAGCCTTCATCGCCGAGATCGTGCGTTCCGGCATCCGTTCGGTCAGCCATGGCCAGACCGAAGCCGCGCGCTCGC TGGGCCTGCGCGAGGGCCCGACCCTGCGCAAGGTGATCATTCCCCAGGCACTGCGGGTGATCATTCCGCCGCTGACCAGCCAATACCTCAACCTGGCGAA GAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCGGGCACCGTGCTCAATCAGACCGGCCAGGCCATCGAGGTAATCGCC ATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCC
DNA Sequence for Gene
>PPUTLS46_013353
GTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCGGTGAAAACCGTCGGCGTGCTCGCATGGATGCGTGCCAATCTGTTCTCCAGCTGGCTCAACA CGCTGTTGACCCTGTTCGCCCTCTACCTGGTGTGGCTGATCGTGCCGCCGTTGCTGCAGTGGGCGTTGATCGATGCCAACTGGGTCGGCACCACGCGCGC CGATTGCACCAAGGACGGCGCCTGCTGGGTGTTCGTGCAGCAGCGCTTTGGCCAGTTCATGTACGGCTATTACCCGACTGAGCTGCGCTGGCGTGTGGAC CTGACCGTGTGGCTTGCCGTGCTCGGTGCCGCGCCGTTGTTCATCAAGCGTTTCCCGCGCAAAGCCTTCTATGGCCTGGGCTTCCTGGTGCTGTACCCGG TACTGGCCTATACCCTGCTGCACGGTGGGTACCTGGGCCTGGAAAGCGTACCGACCAGCCAGTGGGGCGGGTTGATGCTGACCCTGGTGATCGCCACCGT GGGCATCGTCGGCGCCTTGCCGCTGGGCATCCTGCTGGCACTGGGCCGGCGTTCGAGGATGCCGGCCGTGAAAGTGGTGTGCGTGACCTTCATCGAGTTC TGGCGAGGCGTACCGCTGATCACCGTGCTGTTCATGTCGTCGGTGATGCTGCCGTTGTTCCTGCCAGAAGGCATGAGCTTCGACAAGCTGCTGCGGGCGA TGATTGGTGTGATCCTGTTCCAGTCGGCGTACATCGCCGAGGTGGTGCGCGGCGGCCTGCAGGCCATCCCCAAGGGCCAGTACGAAGCCGCCGCGGCCAT GGGCCTTGGCTACTGGCGCTCGATGGGGCTGGTGATCTTGCCGCAGGCGCTGAAGCTTGTGATCCCCGGCATCGTCAACACCTTCATTGCCCTGTTCAAG GACACCAGCCTGGTGATCATCATCGGCCTGTTCGACCTGCTCAACAGCGTCAAGCAAGCAGCCGCAGACCCCGCCTGGTTGGGCATGGCCACCGAGGGCT ACGTGTTCGCCGCCCTGGTGTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGTTTCGAAATGAGTGAAGCGATCAAGCAGCCTGCTGGCCCCGAAGGCATCATCCAGATGCAGGGTGTGAACAAGTGGTACGGCCAGTTCCATGTGCTC AAGGACATCAACCTGAACGTGCGCCAGGGCGAGCGTATCGTGCTGTGCGGGCCGTCCGGCTCGGGCAAGTCCACCACCATCCGCTGCCTTAACCGCCTGG AAGAGCACCAGCAAGGGCGCATCGTGGTCGATGGCGTGGAGCTGACCAACGACCTCAAGCAGATCGAGGCCATCCGCCGCGAGGTGGGCATGGTGTTCCA GCACTTCAACCTGTTCCCGCACCTGAGCATCCTGGAGAACTGCACCCTGGCGCCGATGTGGGTGCGCAAGATGCCACGGCGCAAGGCCGAGGAAATTGCC ATGCACTACCTGGAGCGTGTGCGGATTCCGGAGCAGGCACACAAGTACCCTGGTCAGTTGTCTGGCGGCCAGCAGCAGCGTGTGGCCATTGCCCGCGCGT
Amino Acid Sequence
>amino acid ABC transporter permease
MNAHVFKPDMPPPVKTVGVLAWMRANLFSSWLNTLLTLFALYLVWLIVPPLLQWALIDANWVGTTRADCTKDGACWVFVQQRFGQFMYGYYPTELRWRVD LTVWLAVLGAAPLFIKRFPRKAFYGLGFLVLYPVLAYTLLHGGYLGLESVPTSQWGGLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTFIEF WRGVPLITVLFMSSVMLPLFLPEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFK DTSLVIIIGLFDLLNSVKQAAADPAWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLDTGHKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site