Pseudomonas putida LS46, PPUTLS46_012500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGCCCACGGCCTGTCGGCTGCGGCACTGTTCATCCTGTCTGGCCAGCTGTACGAGCGCCTGCACACCCGTGACATGCGCCAGATGGGTGGCCTGTGG CACCGCATCGCTTACCTGCCGGCCATCAGCCTGTTCTTCGCAGCGGCATCGCTGGGCCTGCCAGGCACCGGCAACTTCGTCGGCGAGTTCCTGATCCTGA TCGGCAGCTTCGTGCATGTACCGTGGATCACCGTGATTGCCACCACCGGCCTGGTGTTCGGTTCGGTGTACTCGCTGATCATGATCCACCGCGCCTACTT CGGCCCGGCCAAGACCGACACCGTGCTGGCCGGCATGGACGGTCGCGAACTGATCATGGTTCTGGGTCTGGCGGTATTGCTGATCCTGCTGGGCGTGTAT CCGCAGCCGTTCCTCGACACCTCTGCCGCCACCATGAGTGGTGTGCAGCAGTGGCTCGGATCCGCTTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
DNA Sequence for Gene
>PPUTLS46_012500
ATGGAATTCACCACTCAACACTTCATCGCATTGGCGCCGATGCTGATCACCACCATCACCACGGTGGTGGTGATGCTGGCGATCGCCTGGAAGCGCAACC ACTCGCAGACCTTCCTGCTGTCCACCGTGGGCCTGAACCTGGCCCTGCTGTCGCTCCTGCCGGCGCTTAAGGTCGCGCCGCTGGCGGTCACCTCGCTGAT CACCATCGACAAATTCGCCTGCCTGTACATGGCGATCATCCTCATCGCGACGCTGGCCTGCGTCACCCTTGCCCACGCCTACCTCGGCGAGGGCTCCAAG GGTTTCCCGGGCAACCGTGAAGAACTGTACCTGTTGCTGCTGATGTCGGCCCTCGGTGGCCTGGTGCTGGTCAGCGCCAACCACCTGGCCGGCCTGTTCA TCGGCCTGGAGCTGCTGTCGGTACCGGTCTACGGCCTGGTGGCGTATGCCTTCTTCAACAAGCGATCGCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCCGCAGGCTCGGCTTTCCTGCTGTTCGGCATGGCACTGCTGTACGCCGACGCCGGCAGCCTGAGCTTCGACCAGATCGGCAAAGCCCTGGCTACCACC AGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTCGGCCTGGCCTTCAAGCTGTCGCTGGTGCCGTTCCATCTGTGGACCCCGGACG TGTACGAAGGCGCCCCAGCACCGGTCGCCGCGTTCCTGGCAACCGCCAGCAAGGTGGCAGTATTCGCCGTTGTCGTACGCCTGTTCATGCTCTCCCCTGC TGCCAGCAGCGGCGTGCTCAGCACCGTACTGGCGGTGATTGCCGTAGCCTCGATCCTGATTGGTAACCTGCTGGCGCTGACCCAGAGCAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCCCACTTCGGTTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCA CCTACGTGATCACCAGTCTGGGCGCCTTCGGCGTCATCACCCTGATGTCCTCGCCATACGGCGGCCGTGACGCCGATGCCCTGTACGAGTACCGCGGCCT GTTCTGGCGCCGCCCGTACCTGACAGCGGTACTGACCGTGATGATGCTGTCGCTGGCGGGTATCCCGCTGACCGCCGGCTTCATCGGCAAGTTCTACATC ATCGCTACCGGCGTCGAATCGCACCTGTGGTGGTTGGTCGGTGCACTGGTGATCGGTAGCGCCATCGGCGTGTACTATTACCTGCGCGTCATGGTTACCC TGTACCTGGTCGAGCCGAATCTGCGTCGTCACGACGCCCCGCTGAAGTGGGAACAGCGCACCGGCGGCGTCATGCTGCTGGCTATCGCCATTCTCGCTTT CGTACTGGGTGTGTACCCGCAACCGCTGCTGGAACTGGTTCAGCAAGCGGGCCTGCAACTGATCGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACCCTGGCAGCCCCAGTAATAGAAAACACCCCGCCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGTTACCTGCGCCCAATGGTGCCTCACTCACTC GGGCAGCCCTGGCCTGCGCCCGGCAAGGCGGCCTTGCGCAAATCACCATTGGCCGAAGGCAGGTACACTTCCGGGTTGGGCATGCCGCTGGGGGAGAGTT CATGGGTCATTTCGAATTCGGCGCGCACTGACCAGCCACACGCCTCGGTGGTGCATTGCAAATAAGCGATTCGCAGGAAAATATGGCGCCCTTCGCTAGT ACGTATGCGCATCCGGCTGTGGCAATGCGGGCAAACCAGCTTGTAAGTACTCACGGCAAGTACCTGCTAGCATTGCCCAGGCTAGCCTGTGTATCAGTAT TGGCTGCAACTGTGGGTGTATTCTTCAATTTGATGGTTCTCATTGCAGAAGTGCTCCTTAAAACGCAGGGCTGTATTCATAACGAGTAGTTTAAGCCCAT
Amino Acid Sequence
>NADH:ubiquinone oxidoreductase subunit N
MEFTTQHFIALAPMLITTITTVVVMLAIAWKRNHSQTFLLSTVGLNLALLSLLPALKVAPLAVTSLITIDKFACLYMAIILIATLACVTLAHAYLGEGSK GFPGNREELYLLLLMSALGGLVLVSANHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYADAGSLSFDQIGKALATT SMPSLVAQLGLGMMLVGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVVVRLFMLSPAASSGVLSTVLAVIAVASILIGNLLALTQSNLKR LLGYSSIAHFGYLVIALVASKGLALEAMGVYLVTYVITSLGAFGVITLMSSPYGGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI IATGVESHLWWLVGALVIGSAIGVYYYLRVMVTLYLVEPNLRRHDAPLKWEQRTGGVMLLAIAILAFVLGVYPQPLLELVQQAGLQLIG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site