Pseudomonas putida LS46, PPUTLS46_011890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCAGCGAGCCGCATGGCCATCTGCAAGCCGCCGGCCTGGCCCAGCGCCTGTTCGCCCTGGACGAGGATGTACAGGCCCGCGCGGTCGGCAACGACCTG GCAAAGGCCGTGGACTACGCCGGGTTCGTCGAACTGTCGCTGCAATACGACAAGGTCAACAGCTGGCTATGAATACGCTCACCGTTGGCGATCAGGCGAT CGCCCTGGACAAGGATGGCTTCCTGGTCGACCTGCAAGACTGGTCCCACGACGCCGCCGAGGCTTTGGCCAAGCGCGAGGGTATCCCGTTGACGGCGGAC CACTGGGAAATCCTCGAACTGCTCCGTCAGTTCTACCAGGAATACCAGCTGTCTCCGGCCACCCGCCCGCTGATCAAGTACACAGCCCTCAAGCTGGGCC CTGAAAAGGGCAACAGCCCGCACCTTAACCGCCTGTTCAACGGCACCCCCGCCAAACTTGCCGCCAAGCTGGCGGGCCTGCCCAAGCCGACCAATTGCAT
DNA Sequence for Gene
>PPUTLS46_011890
ATGACTGAACCTCGTCCGCTCACTCTGGAAACCCCCGCCGAACACCCGTTCGCCGAATTCGTGCGCATTCTCGGCAAAGGCAAGCGCGGCGCGCGTGGCC TGACCCGCGAGGAGGCCCGTGCAGCCATGACCCTGCTGCTGGAAGGCAAGGTTGAAGACACCCAGCTCGGTGCCTTCCTCATGCTGCTGCGGCACAAGGA AGAAAGCGCCGAAGAGCTGGCCGGCTTCACCGAGGCCTTGCGCGCCCACCTGCAGGCGCCGCGCATCGCCGTTGACCTGGACTGGCCCACGTACGCCGGC AAGAAGCGTCACCTGCCCTGGTACCTGCTGGCCGCCAAGTGCCTGGCCAACAATGGCGTGCGCATCCTGATGCACGGCGGTGGCGCACACACTGCCGGGC GTATGTACACAGAGCAACTGCTCAACCCGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTT CCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAACACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCGCGAGTGCTCAAC CCGCTGGGCGCTCGCTGTGGATTGCAGAGCATCTTTCACCCCGGTTACCAGGCCGTGCACCGCGAGGCCAGCCGCTTGCTGGGCGACCATGCCGTGGTGA TCAAGGGTGATGGCGGCGAAATCGAGGTCAATCCCGATGTCATCAGCCATCTCTACGGCACCACGGCGGGTGAGGCGTGGGATGAAGAGTGGCCAGCGCT GAGCGAACGTCGCCATGTCAAGCCGCCCAGCCTGCAGGCAGAACACTTGCTGGCGTTCTGGCGTGGCGAAGTGGAAGACAGTTATGGCGAGAAGGCCCTG ATTGCGACCATGGCGCTGGCCCTGCGTGGTTTGGGACAGCACCGCGAGCAGGCGTTCGTCACAGCGCAAGGCTACTGGGACACTCGAAATAGATCGATTT AG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATAATAGAACCGCGATCTTTGCGCTATTTCTTCGAACGATTTGGCCTAGACTGGGCTCCAACGACAAACAACTTTGTTTCAGGAGCTCACAATGGGC CTATTGATCGACGGCCGCTGGCACGACCAGTGGTATGAAAACGGCAAGGATGGCACGTTCAAGCGTGAGAATGCCCAGCGCCGCAATCAGCTGCCCGCCC CCGAGGCCGGCCGCTACCACCTGTATGTGTCGCTGGCCTGCCCGTGGGCCCACCGCACCCTGATCTTTCGCGCGCTGAAAGGCCTGGAGCCGTTGATCGA CGTGTCGGTGGTCAGCTGGCTGATGCAGGACCATGGCTGGACCTTCGATCAGCAGCAAGGCTCCAGCGGGGACCACCTAGACGCCCTGCAGTACCTGCAC CAGCGCTACACCCAGGATGACCCGCACTACACAGGACGCGTGACGGTGCCTGTACTGTGGGACAAGAAAGAGAAGCGCATCGTCAACAATGAGTCGGCAG
Amino Acid Sequence
>hypothetical protein
MTEPRPLTLETPAEHPFAEFVRILGKGKRGARGLTREEARAAMTLLLEGKVEDTQLGAFLMLLRHKEESAEELAGFTEALRAHLQAPRIAVDLDWPTYAG KKRHLPWYLLAAKCLANNGVRILMHGGGAHTAGRMYTEQLLNPLQIPLCRDWAAVGNALDQHQLAFFPLHDWAPQLQRMIDLRNTLGLRSPIHSLARVLN PLGARCGLQSIFHPGYQAVHREASRLLGDHAVVIKGDGGEIEVNPDVISHLYGTTAGEAWDEEWPALSERRHVKPPSLQAEHLLAFWRGEVEDSYGEKAL IATMALALRGLGQHREQAFVTAQGYWDTRNRSI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site