Pseudomonas putida LS46, PPUTLS46_011180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGGCCCGATCGGCGAAACCCTGGCTCGCCTTGACCTGTCGCTGGCCCAGGGCGACGACGCCGGCGTCGTGTTCGAGGGTAAGGTGGTAGGGCACGACCC GCACTACGGCCTGCTTGACCTGCGCCTGCCCGGCAGCAACGGGCCGCTGCTGCGCATCACCCACGCGGCGCAGGTGATGGGCAGCACCCTGCGCGTCAAG GTTCAGGCCCGGGATGTCAGCCTGGCCCTGGCGGCGGACAGCGCATCGAGCATCCTCAACCGCCTGCCGGTGCGTGTGCGCGAAAGCCGTCCGGCGGCTA ACCCGGCGCATGTGCTGGTCAGCCTGGATGCTGGCGGCAATGCCCTGCTTGCACGCATCACCCGCTTCTCGGCAGACCAGCTCGGCTTGCACATAGGGCA GACACTGTTCGCCCAGATCAAGTCGGTGGCCCTTTTGGGTTGAGCATCCTTAGCGCGCGTATTGTCCATTGATCAGTGACCTGATCGAGGCCTGCTGCCC
DNA Sequence for Gene
>PPUTLS46_011180
ATGCTCGACTGCCCCCTGCCGCGCACCCTGCACTACGTTGACGACAGTCAGCCGGGCCTGACCCGTCGGCGCTGGCGCGACCGTTTCATCTATCTGGATG CCGATGGCCAACGGGTACGTGACAGCGACACCCTCTCGCGCATCGCCGCACTGGTGATTCCCCCGGCCTACACGGATGTGTGGATCTGCGCCGACCCGCA AGGCCACCTGCAAGCTACCGGCCGCGATGCCCGCGGCCGCAAGCAGTACCGCTACCACGCACAGTGGCGCGAACTGCGCGACCAGCACAAGTATGGGCGC ATGCTTGCGTTCGCCCAGGCCCTGCCAAAGCTGCGCACACAGCTGGAAGCCCACCTGGCGCGGCCAGGGCTGGACCGGGAAAAGGTCATGGCACTGGTGG TGAGCCTGCTGGATCACACCCTGATCCGCATTGGCAACCAGCGCTACCTGCGCGATAACCGGTCGTACGGGTTGACCACCCTGCGCAATCGCCATGTGCA GGTCAAAGGCAGCACTATCCGCTTCCAGTTCCGCGGCAAGCGCGGCGTCGAGCACAACGTCACCCTCAACGACCGACGCCTGGCCAACCTGCTAAAACGC TGCATGGAACTGCCTGGGCAGGCGCTGTTTCAATACCTGGATGAAGACGGCCAGCGCCATAGTGTCGGCTCCAGCGAGGTCAATCAGTTTCTGCAGCAAT TGACCGGTGCCGACTTCACCGCCAAGGATTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTGAAGCCCTTGGCCTGGGAGCCGGAAAGTGA AGCCAAACGCCAGGTTGCCGCGATAGTCCGCCAGGTGGCCACACGCCTGGGCAATACACCGGCCGTGTGCCGGCGCTGCTACATCCACCCGGCAGTCCTG GAGCACTATGCCTTGGGGCGCCTGGCCAATTTACCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGCTGTTTCTTCAGGCAC TCGAGGAACAGGAGGACCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTTGTCTATTCAGTCCATGATGCGAAGAAATTTCCCATTAGTCGCCAAGCCCCCTATTCTTGCCAGCGAGCACCTTGGCCGACAAACCGTTGACGGTTT GCTTTGGCACCTGCAACTGAAGACACGCAACAGAATTTGTCTGTCGGGGAATTACTATCCGCCGAAAGCGTCTTTAATGAGAAGGAAGAGGGACAAGCTC CCGCCGCAGCGGCAACTAGCCCTGCGGACTTTTACATCACCAAGGAGAATTACATGCTGATACTCACCCGTAAGGTTGGCGAAAGCATCGTCATCAACGA TGACATCAAAGTCACCATTCTGGGCGTCAAAGGGATGCAGGTGAGAATCGGTATCGATGCACCGAAAGATGTTCAGGTCCATCGAGAAGAGATCTTCAAA CGCATCCAGGCCGGCAACCCGGCTCCGGAGAAACACGAAGACTCACACTAGCGCCACCCGAGGGGCATGGATGCGCTCGACCGCCAGCCTCAGGTGCCCA
Amino Acid Sequence
>DNA topoisomerase
MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSDTLSRIAALVIPPAYTDVWICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGR MLAFAQALPKLRTQLEAHLARPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQVKGSTIRFQFRGKRGVEHNVTLNDRRLANLLKR CMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFTAKDYRTWAGSSLALNLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL EHYALGRLANLPKNRVRKGLDPEEVALLLFLQALEEQEDH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site