Pseudomonas putida LS46, PPUTLS46_009659

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCCAACTGCTCGTTGCTGGTGGCCTTGGCCCCGATCAGAAGCCAGTCACAGGGCGGCATGTCGGCGGCACTGACGTAAGCCTGCACCCGCATGTGCAG TGCGCCATGCACGGCACTGTCCAGGCTCAGCCCGCGTTCACAAACGGCCTGGTACTCGCTGCGCAACAGAAAATGCACATCGAAACCGGCCCGGGCCAGC ATCAACCCATAAAAGCCGCCGATGGCGCCACTGCCGATGATGCCGATGCGAGGGGGGTGCGAATGCATGCCAATCTCCAGGTAAAGGGTCAGCACTCTTT TTACACAGGTTACGTAGCGCTGGGCAGTCCATTCGCGCGCAACCCCCTCGCTCAGGTAAAAACCCCACAATGACTGGGTTCAGCCCATTGTCGTGCCATC TGTAACGCGCTAAGGTTCGGCTCCCCGCTGCGATTATTCTTGCTGCTGGGCCGCACGGGGATAGTTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
DNA Sequence for Gene
>PPUTLS46_009659
ATGGCTGATTTACCGATCGATGACTTGAACGTTGCCTCCAACGAGACCCTGATCACCCCTGATCAGCTCAAGAAGGAAATCCCCCTCAGCGCCAAGGCCC TGCAGACCGTGACTGCCGGCCGTGAAGTGGTGCGCAATATTCTCGACGGCAAGGACCATCGCCTGTTCGTCGTGGTCGGCCCTTGCTCCATCCACGACAT CAAGGCAGCCCACGAATACGCCGAGCGCCTGAAAGTGCTGGCCGAAGAAGTGTCCGATACGCTGTACCTGGTCATGCGCGTGTACTTCGAAAAGCCGCGC ACCACCGTCGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGATGACTCGTTCAAGATCCAGGACGGCCTGCACATCGGCCGCAAGCTGCTGCTGGACC TGGCCGAAATGGGCTTGCCGACTGCCACCGAAGCGCTCGACCCGATTTCCCCGCAGTACCTGCAAGACCTGATCAGCTGGTCGGCCATCGGTGCCCGCAC CACCGAATCGCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCAAGAACGGCACCGACGGCGGCCTGACCGTTGCCATCAATGCC CTGCAGTCGGTGTCCAAGCCGCACCGCTTCCTGGGCATCAACCAGGAAGGCGGCGTGTCGATCGTCACCACCAAGGGCAACCCATACGGCCACGTGGTAC TGCGCGGCGGCAATGGCAAGCCGAACTACGACTCGGTCAGCGTCGCCCTGTGCGAACAGGACCTGGCCAAGGCCAAGATCAAGGCCAACATCATGGTCGA CTGCAGCCATGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGAGAACGTCGCCAACCAGATTCTCGAAGGCAACCAGTCGATCATCGGC CTGATGGTCGAAAGCCACCTGAACTGGGGCTGTCAGTCCATTCCGAAAAACCTGGACGAGTTGCAGTATGGCGTGTCGATCACGGACGCCTGCATCGACT GGTCGGCGACCGAGAAAACCCTGCGCAGCATGCATGCCAAGCTCAAGGATGTGCTGCCGCAGCGTAAGCGCGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATTGCGGGAATAAAAAACGCCGGGCACTGCCCGGCGTTTTTTTGTTGTGTCGGGTGCCTATGGTCAGCTCAGGCCTTGCTCGAATGCCGCTGCTGGCG CTCCATGTAACGCTCCACATACGAGCAAGACGGGATCACCGTGTAGCCCATCTGCTCGGCGTACTCCAGCGCCCGCTCGGTCAGGGCGGCAGCGATCCCA CGGCCGCGCAGGGCGTTGGGCACGAAGGTGCGATAGATGTCCAGCGTCTGCTTGCCCAGATCCATGTACGTCAGGTAGGCACGATGACCGTCCACGTTGG TCTCGAACTGATGACCGGCCTGGTCATGGTGGATGGTCAGCGCTTCGCTCATCACTACTCCTCGCAGGTCTTCTCGGCAGACCCTTACCTTAACCGATGG TGGTTTATCCGGCACAGAATCCTCTACGCCACCTGTTGCCGCTTCGACCATTGGACGATTGTAATCGTTCGGATCGTCTGGCACTCACAAGATAGTAGGC
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNETLITPDQLKKEIPLSAKALQTVTAGREVVRNILDGKDHRLFVVVGPCSIHDIKAAHEYAERLKVLAEEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRKLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSKPHRFLGINQEGGVSIVTTKGNPYGHVVLRGGNGKPNYDSVSVALCEQDLAKAKIKANIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQSIPKNLDELQYGVSITDACIDWSATEKTLRSMHAKLKDVLPQRKRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site