Strain | Pseudomonas putida LS46 Contig08, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCTGACCTGGGCTCGGTCAAGCAGACCCTGCGTTCCACGGGTGACGTCAAGCAGTCCAACCTGATCCGCCAGCCAGATGGCAGCGTGGCATTCCTGGTC GACTTCGCCGGCCCGGCGCTTGCGGCCCTGCCGGAAGACACCGCCGTGCGCAGCCAGATCAGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGC GCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGT ACCGGTCGAGCCCGCCAAGCCTGCCCAGGACGCCAAGCAGGACAAAGCCGCAGCCAAGCATGCCAAGGCCGAGAAAGCTGTCAAGGCTGAGCAATCTGCC AAGGCCGAACAACCTGCCGCCGATGCGGCGCCCACCAACGGGGCCCCGGCCACCACCGAGAAGGTGCTGACCGAGACCTGGAGCTATCAGTTGCCTGCCG
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DNA Sequence for Gene |
>PPUTLS46_005511
ATGAGTAACTCAAGCGCAAGGCCGGAATCGCTTGGCGAGTACCTGGCCCACCTACCCCTGAGCGACGAGCAGCGGGCTGAACTTGCCAGCTGCACCTCGT TCAGTGAGCTACACCAACGCTTGGCGGCCAACCCGGCCGCCAGCTCTGCCGAGGCCGTGCAGGCCTCGGTGGGCCCGCGCCTGACCGTGGGCAGCGCCGC CGAGCTGGAAGACGCCGAAATGCTCGGCGTCGACGGCAGCGGTCGCCTGTGCCTGAAGATCGCCCCACCGATCAAGCGCACCAAGGTCGTGCCCGAGCCA TGGCGCACCAATGTGCTGATCCGCATGTGGCGACGCATGACCGGCCGCCCCAACGCCCCGCAGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCA CGGTTGGCTCGATCCGCCGTTACATCCTGCTGACGCTCATGATCGGCCAGACCATCGTCGCTGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTG GTCGTTCGTGGACTTTGACGAAATCGTCAACCAGCCGCTGTGGGACACGGTGGTGCAGGTGTGGCCGTATGCCCTGCAAACTTCCATCCTGATCCTCTTC GGCATCCTGTTCTGCTGGGTGTCGGCGGGCTTCTGGACCGCGCTGATGGGCTTCCTCGAGCTGCTCACCGGGCGTGACAAATACAAGATTTCCGGTAGCA GCGCAGGCAACGAGCCGATCGCGCCCGAGGCGCGTACCGCGCTGGTGATGCCGATTTGCAACGAAGACGTGCCGCGGGTGTTCGCCGGCCTGCGCGCAAC GTTCGAGTCGGTGGCTGCCAGCGGCAACCTCGACCGGTTCGACTTCTTTGTGCTCAGCGACACCAACGACACCGACATTGCCGTGGCCGAGCAACAGGCC TGGCTGGATGTGTGCCGCGAAACCAAAGGCTTTGGCCGCATCTTCTACCGCCGCCGTCGGCGCCGTGTGAAGCGCAAGAGCGGCAACCTCGACGACTTCT GCCGTCGCTGGGGGGGCGAGTACAAGTACATGGTCGTGCTCGACGCCGACAGCGTCATGAGTGGCGAGTGCCTGAGCAGCCTGGTGCGCCTGATGGAGGC CAACCCGGACGCCGGCATCATCCAGACCGGGCCGAAAGCCTCGGGCATGGATACCCTGTATGCACGCATGCAACAGTTCGCTACCCGCGTGTACGGCCCA CTGTTCACTGCCGGTCTGCACTTCTGGCAGTTGGGTGAGTCGCACTACTGGGGCCACAACGCGATCATCCGCATGAAGCCGTTCATCGAGCACTGCGCCC TGGCGCCGTTGCCGGGCAAGGGCGCGTTCGCCGGTGCCATCCTTTCCCACGACTTCGTCGAAGCCGCGCTGATGCGCCGTGCCGGCTGGGGTGTGTGGAT TGCCTACGACTTGCCGGGCAGCTACGAAGAACTGCCGCCAAACCTGCTCGACGAGCTCAAGCGCGACCGCCGCTGGTGCCACGGCAACCTGATGAACTTC CGCCTGTTCCTGGTCAAGGGCATGCACCCGGTTCACCGTGCGGTGTTTCTCACCGGGGTGATGTCTTACCTGTCGGCGCCGCTGTGGTTCCTGTTCCTGG TGCTGTCGACCGCGCTGCTGGCGACCAACACGCTGATGGAGCCGCAGTATTTCATCGAGCCGTACCAGCTTTACCCGCTGTGGCCGCAGTGGCACCCGGA GAAGGCTGTGGCGCTGTTCTCCACCACCATTGTGCTGCTGTTCCTGCCCAAGCTGCTTAGCGTCATCCTGATCTGGGCCAAGGGCGCCGTCGAGTACGGT GGACGCGTCAAGGTCACCTTGTCGATGCTGATGGAGATGCTGTTCTCCATGTTGCTGGCACCGGTACGCATGATCTTCCACACCCGCTTCGTGCTGGCCG CGTTCCTCGGCTGGGCTGCGACCTGGAACTCGCCGCAGCGTGACGACGACTCCACGCCGTGGGGCGAAGCCGTGCGCCGGCATGGCCCGCAGACGCTGCT GGGCGTTGCCTGGGCCGCACTGGTGGCGTGGTTGAACCCGAGCTTCCTGTGGTGGCTGGCGCCTATCGTCGGTTCGCTGGTGCTGTCGATCCCGGTATCG GTGATTTCCAGCCGCACCCGCCTGGGCCTGGCGGCCAAGGACGAGAAGCTGTTCCTCATCCCAGAGGAATACGCCACCCCACAAGAGCTGTTGGCTACCG ACCAGTACACCCACGAAAACCGCTGGCATGCCTTGCATGATGGTTTCGTGCGGGCCGTGGTCGACCCGCGGCAGAACGCCCTGGCCTGCGCCATGGCCAC TGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCAATTGAAGTCGGGCCAAAAGGCCTGGACCTCAATACTCGC CTGGCACTGCTCAGCGACCCGGTGGCACTGAGCCGCCTGCACGAGCAGGTGTGGGCCGAGCACAATGCGGCCTGGATCGATGTGTGGCGTGCGTCGATCA ACAATGACCCGCATTCGCCGCTGTTGCCGTTGCACCCGGAAAACGCAGGCCAACCGGCACTCGTCGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGGGCCTGTTCGCGGGTGAACCCGCTCCTGCCAGGGATACACATTCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAGCCCCCTCATTTT GGCCAACAAAGTCCCCCCGCGGCTCTAGGTCCTCGGGCCGCCATGCGTTAGCATCCTTCTCCGATACGACGCTTCGGCCAGTACGGCCGTGCCAACACAA TAAGATTCGCTACTTTTCTTGCTAGGGGACTTGGTGATGATCAAGAAATACCTTTCGCGACTGCTGGTCGGTGTGACCGCCCTGGTCGCCGTGACCGCGG CCCAGGCGGGCGCCATCGATGACGCGGTCAAGCGCGGCACCTTGCGGGTGGGCATGGACCCAACCTACATGCCGTTCCAGATGACCAACAAACGTGGCGA GATCATCGGCTTCGAAGTCGATATCCTCAAAGCCATGGCCAAGTCCATGGGCGTGAAGTTCGAGGCAGTGTCCACCGCCTATGACGGCATCATCCCGGCC
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Amino Acid Sequence |
>glucosyltransferase
MSNSSARPESLGEYLAHLPLSDEQRAELASCTSFSELHQRLAANPAASSAEAVQASVGPRLTVGSAAELEDAEMLGVDGSGRLCLKIAPPIKRTKVVPEP WRTNVLIRMWRRMTGRPNAPQPPKRELPPARWRTVGSIRRYILLTLMIGQTIVAGWYMKGILPYQGWSFVDFDEIVNQPLWDTVVQVWPYALQTSILILF GILFCWVSAGFWTALMGFLELLTGRDKYKISGSSAGNEPIAPEARTALVMPICNEDVPRVFAGLRATFESVAASGNLDRFDFFVLSDTNDTDIAVAEQQA WLDVCRETKGFGRIFYRRRRRRVKRKSGNLDDFCRRWGGEYKYMVVLDADSVMSGECLSSLVRLMEANPDAGIIQTGPKASGMDTLYARMQQFATRVYGP LFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNF RLFLVKGMHPVHRAVFLTGVMSYLSAPLWFLFLVLSTALLATNTLMEPQYFIEPYQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAVEYG GRVKVTLSMLMEMLFSMLLAPVRMIFHTRFVLAAFLGWAATWNSPQRDDDSTPWGEAVRRHGPQTLLGVAWAALVAWLNPSFLWWLAPIVGSLVLSIPVS VISSRTRLGLAAKDEKLFLIPEEYATPQELLATDQYTHENRWHALHDGFVRAVVDPRQNALACAMATARHGQAAPIEALRAERVAKAIEVGPKGLDLNTR LALLSDPVALSRLHEQVWAEHNAAWIDVWRASINNDPHSPLLPLHPENAGQPALVGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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