Pseudomonas putida LS46, PPUTLS46_004324
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida LS46 Contig07, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCAC CAGTGCCCTGGATGCACAAAGCGAATACTTGATCCAGCAAGCGCTGCCCAGCCTGATGGCCGGCCGTACCACGCTGGTGATCGCCCATCGCCTGGCCACG GTACAGCATGCCGAGCGCATCGCGGTCATCGACCAAGGCCGGCTGGTGGCGGTGGGCACCCACCGTCAGTTGATCGAGGACAGCCCGCTGTATGCGCGGC TGGCAGCGCTGCAGTTCACCACGGGCTAGCGTGTCGTGGCTTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCT CGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCTGCACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCG
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| DNA Sequence for Gene |
>PPUTLS46_004324
ATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTTTGTTTCCAGTTCCTGTCGT CCAGCGTGCGGGGCTACGCCGAGCTGGTCGACGGGCCGCTGCGGGCCTCGCAATTGATTGACGAAGCCAACCTGCAGTTCAAGATCCAGGTGCAGGAATG GAAGAACGTGCTGTTGCGCGGGCGCCAGCCTGCGGAAATGGACAAGTACTGGCAGCAGTTCCAGGCCCGAGAACAGCAAGTTCAACAACTGCTCGGGCAA TTGATCGACAACAGCGATGCCAGGCTCAAGGTGTCGCTGCAGCAATTGCGGGACAGCCACCGCCAGTTGGGCCAGGCCTATGCGCAAGGTCGCCAGGCCT TCCTGGCGGCAGGCGGCGACCCGGTAGCGGGCGACCGGGCGGTCAAAGGCGTGGACCGTGCCGCCAGTGAGCAAATGAGCGAACTGGTCGAGCAACTGCG CGCCGATGCCCGCCAGCGTGCAGCCAGCATCAATGCCAGTGCCGAGCGCACGGTATGGTTGGGCCTGCTGGTGATGCTGGCTTCTGCGGTGCTGGTGGGG CTGCTCAGCCTGTGGCTGGTCAACCGTAGCCTGATCGAGCCGATCCGCCAGTTGATCGAGTACGTCGCGCAGCTCAGTCAGGGCTGCTTTGCTGCCCGGG TCGACAGCCGTCGGGAGGATGAGCTGGGGCGCCTGGCGCGGGCGGCCAACACCCTGCGTGACTTCCTTGCCGATACTGTCGGCCGGCTGCAGGACAACGC TCAGGAGCTGGAAGGTGCCAGCGGGCAGTTGCGCAGTATTGCCGGTGACATGGCCCGCGGTACTCATGACCAGTTCCAGCGTACCGACCAGGTGGCCACG GCCATGCACGAAATGTCCGCCACTGCCCAAGAGGTCGCTCGCCACGCCGCCGAGGCTGCCCGCGCGGCCAATGACGCCGACCACAGCGCTCAGGCCGGCG AGCAGGTGATGCAGCAGACCATCGACATTATCGGCGCGGTCAACCGCGAAATTGCCGGCACGGCGTCGGTAATTCGCGACCTGGAGCATGACAGCACACG TATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAGCAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCGGGCGAAGCCGGG CGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGCAGCCTGGCCCAACGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAG GGGCGGTGGAGGCGGTCAAGGCCATCGAAAGCGGCCAGCAACGCAGCCAGGAAGGGGCTGAGCAGGTCGAGCAGGCCGGGCAGATGCTGCAGCGTATCAC CCAGGCGGTGGAGGCGATCCGCGACATGAACCGGCAAATCGCCACTGCGGCCGAGGAGCAGACCAGCGTGGCCGAAGATATCTCGCGTAACCTGATCGAA ATTACCCGGATTGCCACGGCCAACCAGGAAGCGGTGCAGCATACCGAGCAGGCGGGGCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCT CCCGGCTGACCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGGGTCTGCAGGGGTTGCATGTGCCCCTGGAGGCTGAAGCGGCGCACTGACGTATTTTTCGCACACAACAAAAAGCCCGCGCAAGGCGGGCTTTTTGAC AAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGACCAAAATCCTAC TGCATCCCGTTTTTGCCCGCAAGCCCTTGTTGTTTAAAGGGCCATGGCCTGAACGGGGCCTTGATCAGAGCTCTTTGACGGTGCGGATCTGGTCCTTGTT CAGGCGCGTGCGCTTGCCGTCGAGTTGCTCGAATTCATAGAAGCCAGAGTCTTCGTCGTAGGACGGTTTGTCGGTTGCCTGGATCTCCCGGCCATCGTTC AGGGTAATGACGGTTGGGGTCGAGCAGCCAGCAAGGGCGCCCAAACCCAAGGCAAGCAGGAAGGCGGGTAGGGTCCGTTTGATCATCGTGTTTCTCCAAG
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| Amino Acid Sequence |
>methyl-accepting chemotaxis sensory transducer
MLRKSLRVQILSLLGGSVLAMLLIALVCFQFLSSSVRGYAELVDGPLRASQLIDEANLQFKIQVQEWKNVLLRGRQPAEMDKYWQQFQAREQQVQQLLGQ LIDNSDARLKVSLQQLRDSHRQLGQAYAQGRQAFLAAGGDPVAGDRAVKGVDRAASEQMSELVEQLRADARQRAASINASAERTVWLGLLVMLASAVLVG LLSLWLVNRSLIEPIRQLIEYVAQLSQGCFAARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVAT AMHEMSATAQEVARHAAEAARAANDADHSAQAGEQVMQQTIDIIGAVNREIAGTASVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAG RGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTSVAEDISRNLIE ITRIATANQEAVQHTEQAGQRLHGLSGQLGEVTSRLTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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