Pseudomonas putida LS46, PPUTLS46_002097

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig03, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGGTGCTCAGTGAGGGCGAGGCGTGCCTGCGCCTGCTTGATGAGGCCTGCCGGGTGTCGGCGATCAAGGGTTCAGTCAGCCTGCAGCCGTTGCGGGGT CCAGCCGTGATGCTACAGGCCGGCCAACAGGCCAGTTTGCAGGCGGCCGGCGTTGGCCCTGTCAAAGCGTTCGACGCATGGCAACTGGGCTGGCGCGAAG GTGCGCTACGGTTGGACGACCGCCCGCTGGGCGAGTTGCTGCACGAACTGCGCAGGTATCGCCCCGGCGTACTGCGCTGGGCACCAGAACTGGAGCGCTT GCGTGTTACCGGCACGTTCCGCCTTGACAACACCGACCGGGTGTTGGCCCTGCTCGCCGCCAGCCTGCCGTTGCAAGTGCAGACCCGCACGCGTTATTGG GTGAGCCTGACCGCACGAGAACATCGAGCATGAGGCTGTCCCCTTTTTTTCACTCGCCGGTCATTACCGGTAGGAGAAAATAAAAGGGGAGCCTTGTTCA
DNA Sequence for Gene
>PPUTLS46_002097
ATGCCTGCAGTAAAAACTTGCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATG AGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCCGACCAGGCCGGTGTCAGCCTTTCGCTGGACCCGGC ATTGGTAGAGGGCCGGCAAAGTAACGGCTTGTCCGGTCGTTACAGTGTCGATGAAGGCTTCAACCAGTTGCTGCGCAGTAGCGGCCTGCAGGCGCTACCA GTGGGTGAGGGGGCCTTCACCCTGATGCCAGCCCCCCAGGCCAGTGGCGCGCTTGAAATCGCCCCCACCCGCATCGTCGGCGGCCTGGCCGCAGGCAACG AAGCGCAGCCGTATGCCGGTGGCCAAGTGGCACGCCAAGGGGCACAAGGCTTGCTCGGTTCGCGCGACTTCATGGAAACCCCGTTCAGCATCACCAGCTA CACCAGCGACCTGGTCAAGAACCAACAGGCGCGCACCTTGGGCGAGCTGATTGCCAGTGACCCTTCAGTGCGTGCTACCAACCCGGCGGGCGGGCGTTTC GAGCAGTTCACCATTCGCGGCTTCAGCCTGTTCAACAGTGATGTGGCCTACAACGGTCTTTATGGCATCTTGCCGACGTATTCGATCGACATGGAAATGG CCGACCGGGTCGACATCATCAAAGGCCCCAGCCAGTTGATCAATGGCATATCGCCGCGTGGCAGCGTGGGCGGCGGTATCAATGTGCAGCCCAAGCGAGC CGCTGACAAGCCGATCACCGAGTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCCGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAG TTCGGCGTGCGCTTCAATGGGGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAATGGCGGTGCTGGGCCTGGATTTTCGAG GCGAGCGCCTGCGTCTCTCGGCAGACCTTGGCCACACCGAGCGCGATACCGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTGCCCAA AGCCAATGACGTACGCCACAACTACGCCCAGGCCTGGAGCAAGGCGCGTACCAACGACACCTTCGGTGCGCTGAACGCCGAGTACGATATCAGCGAATCG CTGCTGGCCTATGGTGCGGTCGGTGCGCGCAAGAGCAACCACGACTTCCTGCGCCATAATGTGTCGATCACCAACGATGCCGGCGACTTCACCGTGCAGC CGCGTGACTTTACCCGGGACGAGTCGGTGCGCACCGCCATGGCCGGTTTACGTCACTGGTTCCATACCGGGCCGGTGAGCCACGCGCTGAACCTGGCCGC CACCTATTACTACATGGACTTCACCAACGGCGGGGCGCGCTATGCTTCGGCGCCGAGCAACCTCTACAACCCGGTGGCCGCACCGACACCCGGTACGCCA ACCCGCCTCGACCCCGAGGTCTACACGGAAAACCGCTTCTCCGGCGTGGCCCTGGCCGACACCCTTGGCTTTTTTGACGACCGCCTGCTGTTGACCCTGG GTGCGCGCTGGCAACGGGTGCAGGTGGATGACTGGAGCGACGGCGTCAAAGGCGATACGGGCTATGACGAAGAAAAAGTCTCGCCTTCTGGGGGCGTATT GCTCAAGGTCACCGACCAGCTCTCGTTGTATGCCAACTACATGGAGGGCCTGAGCCAAGGCAAGATCGCCCCCTCGACCTCGATCAACGAAGACCAGATC TTCCCGCCGTTCACCAGCCGCCAGATCGAGGTGGGGGCCAAGTACGACCTCGGCCAGGTGGCCTTTACTGCCAGCGCCTTCCGCATTCGCCAGCCGGCCT ACGAGACCAACCCCGCCTCGCGGGTGTTCGGCCCCAATGGCAAGCGTGACAACCGCGGTATCGAGCTGAGTGTGTTCGGTGAGCCGGTGCAGGGCGTGCG GGTGTTGGGTGGGGTGATGTATATCGACAGCGAGCTGACCGACACCGTCGGCGGTGCCTACGATGGCAACCGTGCGCCGGCCACGCCCGAATACAACGTC AATCTGGGGGCTGAATGGGACGTGCCAGGGGTGAACGGCCTGACCTTCACAGCGCGCGGCACTCACTCCAGCTCGCAGTACCTGGACCAGAACAACAGCA AGCGCATCGACGGCTGGGAGCGTTATGACGTGGGTGCACGTTATGCCTTCAAGGTGGACGCCACCGAGGTTACCTTGCGGGCCAGTGTCGAGAATGTGCT CGATGATCGCTACTGGAGCTCGGCAGGGGCGCCGGATGACAGTGAGCCGGGGTTGACCCTGTCCACCCCGCGGACCTATCTGCTCTCGGCCACGGTCGGC TTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGAACCCTTGTATACCCAGCGGGAGCGGACGTGCCCGCGAATCTGGCGACTCGGTGCATGGCACCGGCTTCGGCAGTGTTCGCGGCTGAAACCTTTCC CACAGGGGGGCAGTTGCGTAGCTGATCAGCCCGGCGCAAGCGCCCGGCCCAGCTTCTGCGCCTGCCCCTGCAACACCCGCATCAACTGCAGCGCTGCATG CGAGGGCGGCTCGAAGCGCGAATAGACGAAGCTGATATCGAAGTGAATCTCATCGGCCAACGGCACCACCGCCAGCCCGCTGTCCTGTGCAACGAACTCG TCGATCACGCTGATGCCCATGCCTTGCTTGACCAACGCCACAGCCTCGTTGGCATTGGTGAACGACAACAGTGATTTCAGTTGTAGCCCGCGGCGCCCGA TGTGTTCGGCCAACAGCTTGCCAAACGGCATGTCGGGCCGGAACAGCAGCAACGCATGGCCCTCCAGCTGCTGCAAGGTCAGCGCGGGCTGACCGGCCAA
Amino Acid Sequence
>TonB-denpendent receptor
MPAVKTCRLRPLARAAHPLFAMSLLLCAPAWADEPARRTFQVAPASLGAALTHFADQAGVSLSLDPALVEGRQSNGLSGRYSVDEGFNQLLRSSGLQALP VGEGAFTLMPAPQASGALEIAPTRIVGGLAAGNEAQPYAGGQVARQGAQGLLGSRDFMETPFSITSYTSDLVKNQQARTLGELIASDPSVRATNPAGGRF EQFTIRGFSLFNSDVAYNGLYGILPTYSIDMEMADRVDIIKGPSQLINGISPRGSVGGGINVQPKRAADKPITEFTGSYASAGQAGGAVDIGRRFGEGQQ FGVRFNGVKQAGDTEWDHQRVDREMAVLGLDFRGERLRLSADLGHTERDTDAPQERVLVGANAKVPKANDVRHNYAQAWSKARTNDTFGALNAEYDISES LLAYGAVGARKSNHDFLRHNVSITNDAGDFTVQPRDFTRDESVRTAMAGLRHWFHTGPVSHALNLAATYYYMDFTNGGARYASAPSNLYNPVAAPTPGTP TRLDPEVYTENRFSGVALADTLGFFDDRLLLTLGARWQRVQVDDWSDGVKGDTGYDEEKVSPSGGVLLKVTDQLSLYANYMEGLSQGKIAPSTSINEDQI FPPFTSRQIEVGAKYDLGQVAFTASAFRIRQPAYETNPASRVFGPNGKRDNRGIELSVFGEPVQGVRVLGGVMYIDSELTDTVGGAYDGNRAPATPEYNV NLGAEWDVPGVNGLTFTARGTHSSSQYLDQNNSKRIDGWERYDVGARYAFKVDATEVTLRASVENVLDDRYWSSAGAPDDSEPGLTLSTPRTYLLSATVG F
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site