Pseudomonas aeruginosa HB15, PA15_0323170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa HB15 contig000018, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTCCTTTTAAAACACGGGAAGCGATTCCCGGCCTGTTCACTCAGAGGAAGCCCATCATGGCACTGAGCGTTGAAGAAAAAGCGCAGATCGTTAACGAAT ACAAGCAAGCTGAAGGCGACACCGGGTCCCCGGAAGTGCAGGTAGCCCTGCTGTCCGCCAACATCAACAAGCTGCAGGATCACTTCAAGGCCAACGGCAA GGATCACCATTCCCGCCGTGGTCTGATCCGTATGGTTAACCAGCGCCGTAAGCTGCTGGACTACCTGAAGGGCAAAGACGTGTCTCGCTACACTGCCCTG ATCGGCCGTCTGGGTCTGCGTCGCTAAGCGACGCCGGTCGGCAGCTTGAAGCAAGGAGCTGGAAGTCTGGCGTCGATACCCGCACACGAGGCGGGTATCG GCGTCGGGCTTCCAGCTTCGCGCTTTCTAGGAATCGATTCGGGTCCGACTCCCGGCATTCCACCGATTTCCCCCAAGGCAACATAGAAGGTAAAGACACC
DNA Sequence for Gene
>PA15_0323170
GTGAACCCGGTAACCAAGCAATTCCAGTTCGGTCAGTCGACCGTCACTCTCGAGACCGGCCGTATCGCTCGCCAGGCCACCGGCGCCGTACTGGTCACCA TGGACGACGTCAGCGTGCTGGTCACCGTGGTCGGCGCCAAGTCGCCGGCCGAAGGCCGCGACTTCTTCCCGCTGTCCGTGCACTACCAGGAAAAGACCTA CGCCGCAGGCCGTATCCCCGGCGGTTTCTTCAAGCGTGAAGGACGTCCTTCCGAGAAGGAAACCCTGACCTCGCGCCTGATCGACCGTCCGATCCGTCCG CTGTTCCCCGAAGGTTTCATGAATGAAGTGCAGGTCGTCTGCACCGTCGTTTCCACCAACAAGAAGTCCGATCCGGACATCGCCGCGATGATCGGTACCT CCGCCGCCCTGGCGATCTCCGGCATTCCGTTCGCCGGCCCGATCGGCGCCGCCCGCGTCGGTTTCCATCCGGAAATCGGCTACATCCTCAACCCCACCTA CGAGCAACTGCAGAGTTCCAGCCTCGACATGGTCGTGGCCGGTACCGAAGACGCCGTGCTGATGGTGGAGTCCGAGGCCGACGAACTGACCGAAGACCAG ATGCTCGGTGCCGTGCTGTTCGCCCACGACGAGTTCCAGGCGGTGATCCGTGCCGTCAAGGAGCTGGCCGCCGAAGCTGGCAAGCCGGCCTGGGACTGGA AAGCCCCGGCGGAAAACACCGTGCTGGTCAACGCCATCAAGGCAGAGCTGGGCGAAGCGATCTCCCAGGCCTATACCATCACCATCAAGCAGGACCGCTA CAACCGTCTGGGCGAGCTGCGCGACCAGGCCGTGGCCCTGTTCGCCGGCGAGGAAGAGGGCAAGTTCCCGGCTTCCGAGGTCAAGGACGTATTCGGCCTG CTGGAATACCGCACCGTTCGCGAGAACATCGTCAACGGCAAGCCGCGTATCGACGGTCGTGACACCCGTACCGTGCGTCCGCTGCGCATCGAAGTCGGCG TGCTCGGCAAGACCCACGGTTCCGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCGTCGCGACCCTCGGCACCGCGCGCGATGCCCAGTTGCTGGA TACCCTGGAAGGCGAGCGCAAGGACGCCTTCATGCTGCACTACAACTTCCCGCCCTTCTCGGTAGGCGAGTGCGGCCGCATGGGCAGCCCGGGTCGTCGT GAAATCGGCCATGGCCGTCTGGCCCGTCGTGGCGTCGCTGCCATGCTGCCGACCCAGGACGAGTTCCCCTACACCATTCGCGTGGTTTCCGAGATCACCG AGTCCAACGGTTCCAGCTCGATGGCCTCCGTGTGCGGCGCCTCCCTGGCGCTGATGGATGCCGGTGTGCCGGTCAAGGCGCCGGTCGCCGGTATCGCCAT GGGCCTGGTCAAGGAAGGCGAGAAGTTCGCCGTCCTGACCGACATCCTCGGTGATGAAGACCACCTGGGCGACATGGACTTCAAGGTTGCCGGTACCGAC AAGGGCGTCACCGCCCTGCAGATGGACATCAAGATCAACGGTATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGCCAGATGAACCAGGTCATCGCCAAGCCGCGCGCCGAGCTGTCCGAGAACGCCCCGACCATGCTGCAGATGAAGATCGACTCGGACAAGATCCG CGACGTCATCGGCAAGGGCGGCGCGACCATCCGTGGTATCTGCGAAGAGACCAAGGCCTCGATCGACATCGAGGACGATGGCAGCGTGAAGATCTACGGC GAAACCAAGGAAGCCGCCGAGGCCGCCAAGCTGCGCGTCCTGGCGATCACCGCGGAAGCCGAGATCGGCAAGATCTATGTCGGCAAGGTGGAGCGCATCG TCGACTTCGGGGCCTTCGTCAACATCCTGCCGGGCAAGGACGGCCTGGTGCACATCTCGCAGATCAGCGACAAGCGCATCGACAAGGTCACCGACGTGCT GCAGGAAGGCCAGGAAGTGAAGGTCCTGGTGCTCGACGTGGACAACCGTGGCCGCATCAAGCTGTCGATCAAGGACGTGGCTGCCGCCGAAGCTTCCGGC GTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGAGTCGTGATCGATGAAAACAGGGCCCTCGGGCCCTGTTTTCGTTTCCGCGACACGCTTCTCGGCGAAGGGGGCGAATCCTTGCATTTTGCAAGCCC TGTCATCGCCAATTCGGCATTCTGCAACCGTCTCGCTTCCAGCCTATTTTTTAACTTATTGTTTTTAAAGGATTTTATTTTAGAGAAAAACTGGCACAGC GCTTGCGATATCTACTATGCAACTGACGCCAGGAATGGCTGCAGTTTTTCGAAATCCATAGGAGAAACCGCAATGAAATTCAGCAAACTCGCTATTGCCG CTGCTACTGCCACTGCTCTGAGCTTCTCGATGGCCAATGCGTTCGCTGCCCAGCCCATCAGCCTGGCGGCCAACGACACTATGCAGAAAACCGAAGAAGC GGTTTCCGATACCTGGATCACCAGCAAGGTGAAATCCAGCCTGATCGCCAACAAGAATGTCAGTGGCGTCGATATCAAGGTCGAGACCAACAAAGGTGTG
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVTKQFQFGQSTVTLETGRIARQATGAVLVTMDDVSVLVTVVGAKSPAEGRDFFPLSVHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRP LFPEGFMNEVQVVCTVVSTNKKSDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPEIGYILNPTYEQLQSSSLDMVVAGTEDAVLMVESEADELTEDQ MLGAVLFAHDEFQAVIRAVKELAAEAGKPAWDWKAPAENTVLVNAIKAELGEAISQAYTITIKQDRYNRLGELRDQAVALFAGEEEGKFPASEVKDVFGL LEYRTVRENIVNGKPRIDGRDTRTVRPLRIEVGVLGKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGERKDAFMLHYNFPPFSVGECGRMGSPGRR EIGHGRLARRGVAAMLPTQDEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPVKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTD KGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQVIAKPRAELSENAPTMLQMKIDSDKIRDVIGKGGATIRGICEETKASIDIEDDGSVKIYG ETKEAAEAAKLRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDKRIDKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site