Pseudomonas aeruginosa HB15, PA15_0309225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa HB15 contig000001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACAAGATGGGCTATGAACGCGGCCTGGTGCGCTACACCTCGGAACGCGCCCTGGAAGGTGGCCAGACCCGCTTCCTGCGTCCACGCCTGGTCGGCTAC GCGGCGGTGATGCTGGCGATGATCGGCGCCTTCGTCGTCGCCCTGGATGCCCGCCCGCTGGCCTCGCTGGACGTGACCCGCGACCGTGGGCTGTTCCGCG AGAACGCCGCCGGGCAGATCGAGAACATCTACACCCTCAAGGTCATCAACAAGACCCAGCAGCCGCAGCGCTACCGCCTGCAACTCGACGACGCGCCGGA GTTCCGCCTGCAGGGCGAGCACACCCTGAGCCTGAAGCCCGGCGAGATCCTCGACTTCCCGGTGTCGGTGGCCTCTACCGCCGAACGCGCCAGGGCCGGC TCGCAACCGCTGGCGTTCAGCCTGCGCGGCATCGACGACCCGAACCTGGCGGTCGGCAGCACCAGCACCTTCGTTTCGCCGGCGCGCTGAGGAGGCCGCG
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| DNA Sequence for Gene |
>PA15_0309225
ATGAGGCATGACAACACGGTCCCGGCGCGCATAGAGTGGGCGCCAGCGGCCGTGCCCACGGCCAGCCAGGACAGCGGCCAGGACAAGATGAAGCGCTACG AGAAATTCGCCGACGAGATTGCCGAGCTGATCCGCACCGGCGTCCTCGCCCCCGGGCAGAAGGTGCCCTCGGTACGGCACGCCAGCCGTACCTACGGGGT CAGCGCTTCAACCGTGTTCCAGGCCTACTACCTGCTGGAAAGCCGTGGGCTGATCATGGCCCGCGCACGCTCCGGCTACTTCGTCTGCCAGCACGTGCAG CGGCCGCTGCCGGAGCCGGAGATCAGCCCGCGCCAGGCCGACGCCACCGAGGTCGACGTCAGCGAGCTGGTGTTCTCCGTACTCAGTTCGATCAAGGACC CGGACACCGTGCCCTTCGGCTCGGCGTTCCCCAGCCCGCAACTGTTTCCCCTGCCGCGCCTGGCGCGCTCGATGGCCCATGCGGTGCGCGACATGGATCC GCAGTCGGTGGTCGCCGACATGACGCCGGGCAACCATGGCCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCGGCGGCCTGCTGCTGCCGGTGGAAGAA CTGGTCATCAGCAACGGCGCGCTGGAGGCACTCAACCTCTGCCTGCAGGTGGTCACCCGTCCCGGCGACCTGGTGGCCATCGAGGCGCCGGCGTTCTACG CCACCCTGCAGGTGCTGGAACGGTTGAAGCTGAAGGCGGTGGAAATCCCCGTGCATCCGCGTGAAGGCATCGACCTGGAAGTGCTCGCCGACAGCCTGGA GCGCCTGCCGATCAAGGCCTGCTGGTTCATGAGCAACTTCCAGAACCCGATGGGCGCGAGCATGGACGACGAGAAGAAACGCGCCCTCGCCGAGCTGCTG GCGCGCCACCAGGTGCCGATGATCGAGGACGACGTGTACGCCGAACTGTACTTCGGCCAGCAGGCGCCGAAACCGGTCAAGGCCTACGACCAGGAAGGCC TGGTGATGCACTGCAGTTCCTTCTCCAAGAGCCTGGCGCCGGGCTACCGGGTCGGCTGGGTGGCCGGCGGACGCTACGCCGAGCAGATCGAGCGACTGAA GCTGATGACCAGCCTGTCGGCGTCGATCCCGGCCCAGGCGGCCATCGCCGACTATCTCCAGCACGGCGGCTACGACCGCCACCTGCGCAAGCTGCGCTAC GCCCTGGAGACCCAGCAGAACGCCATGCTCGCGGCGGTGGCGCGTTACTTCCCCGAGCAGACCCGGGTCAGCCGTCCCAGCGGCGGCTACTTCCTCTGGC TGGAGTTGCCCGAGGCGGTCGACTCGCTGCGCCTGTTCCAACTGGCCCTGGCCCAGGGCATCAGCCTCGCCCCGGGGCCGATCTTCTCCGCCACCCGCCG CTTCGCCCATTGCGCCCGGCTCAACTACGGGCACCCGTGGAGCGCGCGGCAGGAGAAGGCGATGGAGACCCTCGGGCGGATCGCCCAGTCGCTGGCGGGA TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCCCGCACACGGAAAGCCACCCCGGCGTAGGGCGGATAACCGCGCGCGGTCATCCGCCATGATCGGCTCGCGTCCCCCATCCCGGTATACGCCGCCGC CCTGCACGAACGCCTTCCCCTGCCCCATCTGATACCCAAATTCCATATCGACCTGAAGCTGTTTTACCCCCGCCCCAGCCCTTAGATTGCAGGCTCCGGC TGGCGCCCCGTCTCCCCCCTCGACGGCGGTCGCCGGCTGTTCATTTCTTTCGGGACTGTACAGATGAACAAAGCAACGACGGAACCTGCCTACAACTACA AGGTGGTTCGCCAGTTCGCCATCATGACCGTGGTATGGGGCGTGATCGGCATGGGGTTGGGCGTACTGATCGCCTCGCAACTGGTCTGGCCCCAGATGAA CTTCGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGGCCGCTGCATACCAACCTGGTGATCTTCGCCTTCGGCGGCTGCGCGCTGTTCGCCACCAGCTAC
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MRHDNTVPARIEWAPAAVPTASQDSGQDKMKRYEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLESRGLIMARARSGYFVCQHVQ RPLPEPEISPRQADATEVDVSELVFSVLSSIKDPDTVPFGSAFPSPQLFPLPRLARSMAHAVRDMDPQSVVADMTPGNHGLRRQIALRYMVGGLLLPVEE LVISNGALEALNLCLQVVTRPGDLVAIEAPAFYATLQVLERLKLKAVEIPVHPREGIDLEVLADSLERLPIKACWFMSNFQNPMGASMDDEKKRALAELL ARHQVPMIEDDVYAELYFGQQAPKPVKAYDQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASIPAQAAIADYLQHGGYDRHLRKLRY ALETQQNAMLAAVARYFPEQTRVSRPSGGYFLWLELPEAVDSLRLFQLALAQGISLAPGPIFSATRRFAHCARLNYGHPWSARQEKAMETLGRIAQSLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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