Pseudomonas aeruginosa HB15, PA15_0308735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa HB15 contig000001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCCGCTGTTCAACGCCTGCACGATGTCCTGTTCGGCGTCACGGCTGGTCAGCATGATCGCCGGCGGAGGCGCATCCAGATGCTCGCGGCTCCAGCGC AGCAATTGCAGGCCGCTGAGGTCCGGCAACTGCCAGTCGAGGATCAGCAGGTCGAAGGTTTCCCGCTTGAGCTGCTTGAGTAGGTCCTCGCCACGGGCGA AACGGTGCACCGTCCAGGCCTGTTCGCCCTGCGCGGGTATCTGCTGCAGGGTCTGCTCGACCCGGTCCAGTTCGGCCGACTCGTCGTCCAGTATCGCGAC ACGCATAAAAGCTGGTCCTGTTCAATCGGGCTAACGCCCCTTTTTCGCTCCAGGAACGGCGAATTACGTACAAATCTGAAGAATTGTGACGAATCTCTCT GGTCGCGACCAGCCCTTGATAGCCTGATTCCAAATAGCCATTAAGCGGGACGAAGAGCCCGCGAGCCAGCGCCAGCCTGACCTATCAAGGAGTCGTAGCC
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| DNA Sequence for Gene |
>PA15_0308735
ATGGGTTTCCGGCCAGTTAGCCAACGTTTGCGTGACATCAACCTGCAGGCCCTCGGCAAGTTTTCCTGCCTTGCCCTGGTCCTCGGCCTGGAATCGGTGA GCCATCCGGCCGGTCCGGTCCAGGCCCCATCGTTCAGCCAGGGCACCGCCAGCCCGTCCTTCGCCACTCCGCTCGGCCTCGAGGGCCCGGCCCGCGCCAG GGCCGAGATGTGGAACGTCGGCCTGTCCGGCGCCGTCAGCGTGCGTGACGAGTTGCGCTGGGTGTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCGACGAATCTGAAATAGCGCGGAAGAATCTGAAGAAATATGGCAAATCTCACAGCAGACAAATCGCGCTTGGTAGATTTCCAACCGCTGAGTAGGCC AAGGAGCAAATGGATTGCTCCGACACAGGGATGTGTAAACCCGCTCCGGCGGGCCGTGGGACGAGACCACTCGAACCATAGTCAGGGGTCGGTAACGGAC GATCGCTCCAGGCAACCGAGCCAACCCCCCCAGGGCTGGCTTCGACACACGGATGTGTCATCTCCCCTTCCTTGTTCGAATCATCCCCTCCCGCTATCCG GACGCCTCGATCCGCGTCCCACCCTGGATCTGAAAAGGACCTCATCATGAAGCAATACGGAGCAGAGTTCTTCGGCACCTTCTGGCTGGTATTGGGCGGC TGCGGCAGCGCAGTGCTCGCCGCCGGCGTACCGGAACTGGGAATCGGCTACCTCGGCGTGGCCCTGGCGTTCGGCCTCAGCGTGCTGACCATGGCCTATG
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| Amino Acid Sequence |
>hypothetical protein
MGFRPVSQRLRDINLQALGKFSCLALVLGLESVSHPAGPVQAPSFSQGTASPSFATPLGLEGPARARAEMWNVGLSGAVSVRDELRWVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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