Pseudomonas syringae pv. syringae SM, PssSM_4249 (dnaJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae SM chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCCATTGAAGCCAAGGTCGAAGAGCTGTCCAAGGTTTCCGCGCCAATCGCTCAGAAGATGTACGCCGAGCAGGCCGAAAACCCGGACGCTGCGGCCAA GCCAGCTGAAGAAACTGCCAAGGCTGACGATGTCGTCGACGCCGAGTTTGAAGAAGTAAAAGACCACAAGTAAGCGCAGGCTCACTTGAAAGCCGGTTGA CCTCTTTCGAGCGCTGACTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGTCTGGAACAAGCAAAAATTTCGGCGTGTGGAGTTGCTC CGCACGCCACGTGGCAAGATCGCGACGCTCCTGCGTGGCGAATCATTCTGCCGCTTTCTCGGCCGGATGCATCTGGCTGCTGAACGAAGACCAGGATCGT TGAATCGACGTGAGTTGGGTCCGGGCCTGTATGGGGCTCAACGAGTTTGGTGCGGCTCAGGAGAGCCTTCGCCGAACGTCCTCAAGAGTGCGGAAGAATT
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| DNA Sequence for Gene |
>PssSM_4249
|dnaJ
ATGGCAAAGCGTGATTATTACGAAGTGTTGGGAGTGGAGCGAGGCTCCAGCGAGGCGGATCTGAAGAAGGCTTATCGCCGTCTGGCGATGAAGCATCACC CTGACCGCAACCCTGATGACAAAGCATCGGAAGAGCTGTTCAAAGAGGCCAACGAAGCCTACGAAGTGCTTTCCGACGCCAGCAAGCGCGCGGCCTACGA TCAGTATGGCCATGCCGGTGTCGATCCGAGCATGGGTGGCGGCGGTGGTTTTGGCGGCGGTGCCGGTGGCGCCAACTTCTCCGATATCTTCGGCGATGTG TTCAGCGACTTCTTTGGTGGCGGCCGTGCCGGTGGAGGCGGTGGTCGTGGCGGCGCTCAGCGTGGTAGCGACCTGCGCTATACGCTGGAGCTGAATCTGG AGGAGGCGGTTCGCGGTACTAACGTGAATATCCGCGTCCCGACGCTGGTCAACTGTAAACCGTGCGACGGCAGCGGTGCCAAGAAAGGTTCTTCGCCTGT CACATGCCCTACGTGCGGCGGCATTGGTCAGGTGCGCATGCAGCAAGGTTTCTTCTCTGTGCAGCAAACCTGTCCGCGCTGCCACGGCCACGGCAAGATC ATCTCTGATCCGTGCGATTCCTGCCATGGCGAAGGTCGCGTAGAAGAGTCCAAGACGCTTTCCGTCAAAGTGCCGCCAGGTGTTGATACTGGTGACCGCA TTCGTCTGTCTGGCGAAGGCGAGGCGGGTACCCAGGGTGGTCCGACCGGCGACCTGTATGTCGTGATCAATGTGCGCGAACACGCGATCTTCCAGCGTGA CGGCAAGCACCTGTTCTGCGAAGTGCCTATCAGCTTTACCGATGCAGCGCTGGGTGGCGAGCTTGAAGTGCCTACGCTGGACGGTCGCGTCAAACTGAAA ATCCCCGAAGGTACCCAGACCGGCAAGCAGTTCCGCTTGCGTGGCAAGGGCGTCGCTCCAGTGCGTGGCGGTGGTGCCGGTGACTTGATGTGCCGTGTTG CAGTCGAAACCCCGGTCAACCTGAGCAAGCGCCAGCGCGAGCTGCTTGAAGAGTTCCGCACCTCGCTTGAAAACGACGAGTCCCATTCTCCGAAAGCCAG TGGCTGGTTTGAGGGTGTGAAGCGTTTCTTCGGCGATCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTATCAACGGGAGCAGGGCATGCGACGTATTGCTGTAGTAGGCGCCGCCGGGCGTATGGGCAAGACCTTGATCGAGGCGGTTCAGCAGGCGCCGGGCG CCGGGCTGACCGCCGCTATCGATCGTCCTGACAGCACGCTGGTGGGCGCTGACGCGGGCGAACTGGCTGCGCTGGGTCGTATCGGCGTGCCGTTGTCAGG TGATCTGGCAAAGGTGGCGGACGAGTTCGACGTTCTGATCGACTTTACTCATCCTTCGGTGACGCTGAAAAATCTCGCGTTCTGTCGCAAGGCAGGCAAG GCGATGATCATTGGTACCACCGGTTTCAGCGCGGAAGAAAAGCAGCGTCTGGAAGAGGCGGGCAAAGACATTCCAATCGTCTTTGCTGCCAATTTCAGCG TCGGTGTTAACCTGTGTCTGAAGCTGCTCGACACCGCTGCACGCGTTCTGGGTGATGAGGTCGATATCGAAATCACCGAGGCGCACCATCGGCACAAGGT
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| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKRAAYDQYGHAGVDPSMGGGGGFGGGAGGANFSDIFGDV FSDFFGGGRAGGGGGRGGAQRGSDLRYTLELNLEEAVRGTNVNIRVPTLVNCKPCDGSGAKKGSSPVTCPTCGGIGQVRMQQGFFSVQQTCPRCHGHGKI ISDPCDSCHGEGRVEESKTLSVKVPPGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHAIFQRDGKHLFCEVPISFTDAALGGELEVPTLDGRVKLK IPEGTQTGKQFRLRGKGVAPVRGGGAGDLMCRVAVETPVNLSKRQRELLEEFRTSLENDESHSPKASGWFEGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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