Pseudomonas syringae pv. syringae SM, PssSM_4224 (eddA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae SM chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGACATGATCGGCCAGCGCTGCTTCTTCAGCCTTGTACACGGTGTCATGGCGATCCACGCGCGAGTTGCCCTGCGAGCGATCGTTATAGACCAGTAG GGTGTCCAGGCTCAGGCGCGTGTTGACCTGTTCATGCAGCGCCAGCAGGGCATCGCGATCCAGGCGGGAGTGAAAGCTCTGCACCAGCAATTGCGGGCCG TAGCGGTCGATGGTCAGCCCGCTGGCACCCTCCTGGCTGCCGTGAAACAGTCGATAGCAGTCCGTGCCCTGCCCATGCAATTGGTCAAGCAACCCCTGGC GATTGTCGAGGGCGACGCTGAGCGCCTGATTCAAGGAAGACATGCTGAGCGCCTCGGGCTGGAATAAGGCGCGGGAGTTTACCAGTTACCGGGCGCCGGA AGTTTTTGAAGTCTGCCATGCGCTTGATCTGCTGCGTTGTCATACAGCGCCAATATTCCCCTGTTACGGTGCTTTTTTGCCTGTCAGCGAGGGGATAACC
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| DNA Sequence for Gene |
>PssSM_4224
|eddA
GTGAGCCAGTTCGATCTCAAGCGTCGCCGTGTCATCCAGGCCGTCGGAACGGTAGGTGCCGGTCTGCTGTTACCAGGTGTTGCGCCGGCAGTCATCGCCT CGGTGCAGGATCGTCCGAAGATGATGGATGGCGTGCAGTCCGGCGATGTGTTCGGCGACAAGGCGATCGTCTGGAGTCGTAGCGACCGGCCTTCGCGCAT GGTTGTCGAGTGGGACACACGCAGCATGTTCACCCAGCCACGCCGTGTGGTGTCGGCGCTGGCCGATCAGCGTAGCGACTTCACCGCGCGGGTCGAGTTG AGCGGGCTGCCGGTCGATCAGGCGATTTTCTACCGGGTGTCTTTCGAGGATGCGCAGAGCGGTGTCGTCAGCGAGCCGTGGTTCGGCCATCTGCGCAGCA CGCCGCAGCAGCGCCGCGACATCCGCTTCGTCTGGAGCGGCGACACGGTGGGGCAGGGCTTTGGCATCAACCCCGATATCGGCGGCATGCGTATCTACGA AGCCATGCGTTTGCGCTTGCCGGACTTTTTTATCCACAGCGGCGACACCATCTACGCCGACAGCCCGGTGCCGGAGCAGCTCACCACGGAGGGCGGACGC GTCTGGCGCAACATCACCACCGAGGCGAAGAGCAAGGTAGCGGAGACCCTCGACGAATACCGGGGCAACTACCGTTACAACCTGATGGATGAAAACCTGC GCCGCTTCAACGCCGAAGTGCCGCAGATCTGGCAGTGGGATGATCACGAAGTGACCAACAACTGGTCGCCCAGCAAACAGCTCGATGATCGCTACAAGGT CAAGGACATCGGCCTACTGTCCTCGCGTGCCCGCCAGGCTTACCTTGAATATGCGCCGCTGCGCTTGCAGGAAGCCGACAACGGCGGGCGCATTTATCGC AAGATTCCCTACGGTCCGATGCTCGACGTGTTCGTCCTCGATATGCGCAGTTACCGCGCCGGCAACGATGCCAACCTGGCCGACAAGCCGGGTCCGACCA CCGCATTCATGGGCCGTGAGCAACTGGACTGGCTCAAGCGCGAGCTCACTGCATCGCGTGCGCAGTGGAAAGTGATCGCGGCGGACATGCCCATTGGGCT GGGCGTGCCGGATGGCGAGGTCAGCCCCGGCGTACAGCGTTGGGAGGCCATCGCCAACGGCAATGACGGCCCGGCGTTGGGGCGTGAGCTGGAGGTCGCC GAATTGCTGGCGTACCTGCGCGCGCAGAAGGTTCGCGATTGTGTCTGGCTGACGGCCGACGTGCATTACTGCGCCGCGCATCATTACCAGCCGGATCTGG CCGTATTTCAGGACTTCGACCCGTTCTGGGAGTTCGTCGCCGGGCCATTGAATGCCGGTAGCTATGGTCCCAACGTGCTGGACAAGACCTTTGGTCCCGA GCTGGTGTTCCAGAAGGCGCCCCCTGCGCAGAACACCTCGCCGTTTGCGGGTTTTCAATTCTTTGGCGAAGTGAATATCGACGGGCAGACCGGTGAACTG ACCGTGGCACTGCGCGATCTGGACGGCGTCTCGGTTTTCGAGCGCAAGCTCCAGCCTGTGAAGGAAGTCAGCCGCATCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAGCGGCAGTCGCGGCGGGGTGATCAGGGTTTCGGAAATTCCGTTCAACATGCTCGCCGTCGGTGGCCTATCATGAGCTACCTAACGACGGGACCGGAC GCGTTGCATGCTGGCTATTTTTCTCGAAACCCTGAATATCACCGCCCCGGTGTTTGCCATGCTGTTTCTGGGCGTGTTCCTCAGGCGAATCGGCGCGATC AATGATGGTTTCATCGTTGCGGCTTCCGGGCTGGTGTTCAACGTCACCATGCCTGCACTGCTGTTTCTGGGCATTATTCACGCCGACCTGCGCACCGCCC TGCAGCCCAAACTGCTGATTTTTTTCAGCATCGCCACGCTTCTGAGTTTTGCATTCGCCTGGTGCTGGGCGATCTGGCGCTGCCCGCACGAAGAGCGCGG GATCTACGTCCAGGGCGCGTTTCGTGGCAATAACGGGGTTATCGGTCTGGCCCTGGCGGCCAGCATGTACGGGCCTCCTGGCATTTCACTGGGCGCCATT
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| Amino Acid Sequence |
>alkaline phosphatase
MSQFDLKRRRVIQAVGTVGAGLLLPGVAPAVIASVQDRPKMMDGVQSGDVFGDKAIVWSRSDRPSRMVVEWDTRSMFTQPRRVVSALADQRSDFTARVEL SGLPVDQAIFYRVSFEDAQSGVVSEPWFGHLRSTPQQRRDIRFVWSGDTVGQGFGINPDIGGMRIYEAMRLRLPDFFIHSGDTIYADSPVPEQLTTEGGR VWRNITTEAKSKVAETLDEYRGNYRYNLMDENLRRFNAEVPQIWQWDDHEVTNNWSPSKQLDDRYKVKDIGLLSSRARQAYLEYAPLRLQEADNGGRIYR KIPYGPMLDVFVLDMRSYRAGNDANLADKPGPTTAFMGREQLDWLKRELTASRAQWKVIAADMPIGLGVPDGEVSPGVQRWEAIANGNDGPALGRELEVA ELLAYLRAQKVRDCVWLTADVHYCAAHHYQPDLAVFQDFDPFWEFVAGPLNAGSYGPNVLDKTFGPELVFQKAPPAQNTSPFAGFQFFGEVNIDGQTGEL TVALRDLDGVSVFERKLQPVKEVSRIV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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