Pseudomonas syringae pv. syringae SM, PssSM_3772 (nrdB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae SM chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGGCCTGGTACCGTGGTCTGAAAACCACCTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCCACCGTCAACACCGGCAAGCTCAACGCT GTATCGAGCGGCGGCCACGGCCCGGACGACTCGGCGATCACCGCCCCGCGTCCAACCGAAGCAGCACCTGCCGGCCCGGCCCCAGTGCCAAAAGCTTGCG CAATCGACGAGCCGGATTGTGAGGCTTGCCAGTAAGGCAACCCGCCTCGCCCCCACAGGAGAAACACAACCCTGTGGGAGCGAGAGGCCAACAAGCCTGA CGCTGTACCTGTAGGAGCGGACTTGTCCGCGAAGAGGCCGGCAAGGATACACATCCCCTTGCCACCCTCCTCCTCACCCAAAGGCCCCGAAAGCCAAAAA TTCATGTTCCTTGCGCGCCACACCTGAAAAGCAAGCAACACCCCCTCTGGATCCAACAGGCCAGTCCACCCGACTGACCCTCAAGCAGGAGAAGTACACC
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| DNA Sequence for Gene |
>PssSM_3772
|nrdB
ATGCTGAGCTGGGACGAATTCGATAAAGAAGACGGCGAAGTAGTCGCCAAAGCGACCAACGCCGGTCATGCCAACGAAGCCAACATGGATCGCCTCGATA GCGCCGGTGGCCTGGCTGCACAGGAAGCCCGCGCCGTAACCGCCGCCGACTCCGCTGCCCTGATCCGTGCCAAGAAAGCGCTGGACGCACTGGACGTCGC TGAAGGCCTGGCCGAGCTCGAAGGCGCCAGCGCCCGCGTTGCCGTTGACGAAAAAATGATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTGCCTTTC AAGTACGACTGGGCCTGGCAGAAGTATCTGGACGGTTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAAACC CGGAAGGCCTGACCGACGACGAGCGCCGCATCGTCATGCGCAACCTGGGCTTCTTCTCCACTGCCGACTCGCTGGTTGCCAACAACCTGGTGCTGGCCGT GTACCGCCTGATCACCAACCCGGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAATCG CTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGTCGGTCGCCAAAAAAGCAGCCTGGGGCCTGAAGTACACCCGTTCGATCTCCG ATCCGAAGTTCGAAACCGGCACCGTCGACACCGACAAAGAGCTGCTGCGCAACCTGATCGCCTACTACTGCGTACTGGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAAATGACCGGCGTTGCCGAGCAGTTCCAGTACATCCTGCGCGACGAGTCCATGCACCTGAACTTC GGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCACCTGTGGGATGCCGAGATGAAAGAAGAAGCCACGCAGATGATTCTGCAAGGCACCCAGC TGGAAATCGAATACGCCCGCGACACCATGCCCCGCGGCGTACTCGGTATGAACGCTGCGATGATGGAAGACTATCTGAAATTCATCGCTAACCGCCGCCT GAGCCAGATTGGCTTGAAGGAAGAGTATCCAGGGACGACCAACCCGTTCCCTTGGATGAGCGAGATCATGGACTTGAAGAAAGAGAAGAACTTCTTTGAG ACGCGGGTTATTGAGTATCAGACAGGTGGAGCTTTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTGCATCCCGCGGAGTTGCAATAAAAGCTGAACCCATCTCATCAAAAATGAAACGGGTTCTGAGAAAAGGGCTGCCAACTGGCAGCCTTTTTATTTTTG TTTCGGCAGAAACGTGAGGTTTGACTCGGTTAAATCCGGTCGAATGCGACTCCGGCCGGGCCTCGCCTGTTATAGCCACGGGCAACCCCCGCGCCGCCGA TATGGATCTCGCCAATGACCCCAATCGGTACCGGCTGGCCATGTGCATCCAACAGGTAAATCCGTGTATTCGCGATCGGACGGCCTATCGGCAGTGAATG ACCGGCTTGAACAGCGCTGTCGCACAGGTAAAAAGTAGAGTCACCCGCCGCTTCCGACGAACCGTAGAAATTCAGTATCGTGGCCGAAGGTAACCAAGCA CGAGTGCGAGCAAGCAGGGAGGACGAAAACACCTCGCCACTGCAAACGATCAGCCGCTTTTCTGGCGAAATTTGTCGGTTCTCTATCCTCGACAGTTCTT
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDGEVVAKATNAGHANEANMDRLDSAGGLAAQEARAVTAADSAALIRAKKALDALDVAEGLAELEGASARVAVDEKMMINCRADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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