Pseudomonas syringae pv. syringae SM, PssSM_1284
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae SM chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCAACCATCAGATCGCGGCGCAGACCGTCTACCACGTCGGTGAGCTGACGCTTGTCGCTCAGTTGATCAGCGCCAAATGCGCGTTCGATCACACTAGT GCCCGATTTGTCTTTCAGAGTCACCAGACGTTCGCCCCGAGAGCCGGCCGGGCCAATACTGGCCTGATAGGGAGCCAGCGCTTCGCTTAGCAGTAAGCTG ATATTTTCCATCCGGATCACCACTCAACAGTTTGAATGCAAAGGTGCTAATCAATGACCATCGGCGACAGCAGAAAGTTCTTTCTATCGCCGAATCGCAG CACCTGTCTGTCATTTCGAGCATGCCTGTTGAATGTGACAAGGAAAAAACCGGACGCCAATGACAACAGAAAGCGAGCTTGTAGGAAGAATCCACCATAA TTCCGCTACGCGTCCTACAAGGTGCCTATGCTCTTGATCACTGCGCTAAACACCTCCAGCGCGTGCAATACCCGTATAGCCTTTTTCACGGAGCCACCTC
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| DNA Sequence for Gene |
>PssSM_1284
TTGAGCGAGTCCGCTGATCGCCCGCTGCGGGTCATCGTGGCTGATGACCACCCGATTTTTCTCATCGGCCTGCGGGTCGTCCTGGAGCAGGACAATCTGG CCAGCGTCGTCGCCGAGGCCTGCAATCCGGACGAACTGCTCCAGGCACTCGAAGGCCACGCATGCGATGTGCTGGTGACCGACTTCATGATGCCCGTCGA ACGGCAGAACGATGGCCTGCGTCTGCTGCAGCGCATCCGCCGGGACTTTCCCACGCTGCCGGTGATCGTTGTCACGACCCTGAGCAATGCCGGACTGTTT CAGTCCATGCTCGACCTGGATGTCCGAGGTCTGTTGAGCAAGGCCAGCCTTGCCGGAGAGCTGCCTGCTGCCATCAAGGGGGTCAGGCGCGGTGAGCTTT TTGTCGCCGATTCGGTACGCAGCGTGCTGAGCGAAGCCCGTCAGCATGGCCCCGATGCGCTACTGCCGGCAGATCGCTTGTCGCCAAGGGAGCTGGAAGT GTTACGCCTGCTCTCGGCGGGCCATACGGTTGGCCAGATCGCTGCGCAACTCAATCGCAGCAAACAGACCGTCAGCGCTCAGAAAGTCGCCGCCATGCGT AAGCTCGGACTGGCCAATGACGCAGCCCTGTTCATTTATTTGCAGGAAAGCGGAATGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCGGGTCGTCTCTGCAAACGGCGTGCAGGTGGCCGCTGTCACGCTCGGCGACCCAGCGCATGAACGCCGAGGCCGACATCGGGCGAGCGATGAAATACC CTTGAATGGCGGGATCGCCCAACGCCAGCAGACTGTGGACGTCTTCAGTCGTCTCGACACCTTCAACCACGACCGACATCGACAGCCTCTGCGCCATCAG CAAGGCACCGGCCACCACCGCCGATTTACGCGCGTCGTCGGCCATGCCGCGCACGAACTCGGTCGGTATTTTCAGCTCGCTGAAAGGTAATTGCAGAAGA CGGTCGATATTCGAGGCGCCCATACCAAAGTCATCGATAGACAACTTGCAGCCCTGCATGCATAACCTCAGCAGGCCTTCGAGCTGCCAGGTTTCCGGGC GCGCGGCGTCCTGCTCGAGAATTTCCAGGGTCAGCGCGGTGGCCGGCACGCCATGACGGGCAAGCGCTTGCGTGATCTGCTCGGCGAAATCCAGCTGTTG
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| Amino Acid Sequence |
>LuxR family two component DNA-binding response regulator
MSESADRPLRVIVADDHPIFLIGLRVVLEQDNLASVVAEACNPDELLQALEGHACDVLVTDFMMPVERQNDGLRLLQRIRRDFPTLPVIVVTTLSNAGLF QSMLDLDVRGLLSKASLAGELPAAIKGVRRGELFVADSVRSVLSEARQHGPDALLPADRLSPRELEVLRLLSAGHTVGQIAAQLNRSKQTVSAQKVAAMR KLGLANDAALFIYLQESGMS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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