Pseudomonas syringae pv. syringae SM, PssSM_0962 (mqo-1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae SM chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCCGGTCAGCGCCTCACTCTTTATGCGCCTGACCTGCCAGCGCTGTCATCGCAGCCATTTCGAGGTTTGGTTCGCGTTCCCAAAAGGACGTGAAAAAC GGGTTTCACTACTTCACAAGAGTGTGGCGAGCAAATGAATAGGTACGCGTTTGTACATGCACCATCAGCGTCTGAACCGGCTCTCTTGAACAGGACTGAC CGCGACTGCGCCTCCATGACCGGAGCCTGACGCCATCGACAGGCGCCCGTTGCACACGGGGCTCCCTGACGATGGTCGAATGGCCTCGCAGGCCTGGAAA TGCGTTCATGAAGTATTGATGAACCATGACCGGGCCTGACCGGGACCTGCGCTTTGGATGCGAAAAATTGCGAAGAATCGGTGAGGCGATCCTGGCCAGG CAAACGAGGGTAGACATTTGATCCAGCCCACGAATACCTGGCAACCAGCCTCAGGATCGTATGCCGTCAATTTGGTGCTGCAGATTTTGGAGACGCGTTA
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| DNA Sequence for Gene |
>PssSM_0962
|mqo-1
ATGGCGCATAACGAAGCAGTTGATGTAGTACTGGTCGGAGCGGGCATCATGAGTGCCACTCTGGCGGTATTGCTAAAAGAGCTCGACCCCGGCATCACGC TGGAAGTCGTTGAGCTGATGGATTCCGGTGCTGCGGAGAGTTCCAACCCGTGGAACAACGCCGGTACCGGCCACGCCGGTCTGTGCGAGCTGAACTACAC GCCGCCTGCGGCTGATGGCTCAATCGACATCAAGAAAGCGGTGCACATCAACACCCAGTTCGAAGTCTCGAAACAGTTCTGGGCCTACCTGGCACGCAAG GGCACCTTTGGTTCAGCCCGGTCATTCATCAACCCGGTTCCACACCTGAGCTTCGTGCAGGGCGAAAAAGGCGTCTCGTTCCTCAAGACCCGTTTTGAAG CCATGAGCAAGCATCACGCCTTCTCTTCGATGGAATACACCGAGGACAAGGCAACGCTGGCCGAGTGGATGCCATTGATGATGCCTGGTCGGCCTGCGGA CGAAAAAATTGCTGCAACGCGGATGATGAACGGCACCGACGTCAACTTTGGCGCGCTGACCAACCAACTGCTCGGCCACCTGACTAGCGCTCCAGGGACG CAGATCAAGTACCGCAGCCGGGTGACCAACCTGACCCGCAACGGTGCTGGCTGGACCGTCAGCGTCAAGGACGTGAATGGCGGCGGCACGCGTGAGATAG ATGCCAAGTTCGTGTTCCTCGGTGCCGGTGGCGCAGCGTTGCCTCTGCTGCAGTTGTCGGGCATTGAAGAAAGCAAGGGCTTTGGCGGCTTCCCGGTCAG CGGCCAGTGGCTGCGTTGCGACAACCCGGAGGTGGTCAAGCACCATCAGGCCAAGGTCTACAGCCAGGCAGCCGTTGGCTCGCCGCCAATGTCGGTCCCG CATCTGGATACCCGCGTGGTCGATGGCAAGAAGTCCCTGCTGTTCGGACCTTATGCCGGTTTCACCACCAAGTTCCTGAAACACGGCTCGTACCTCGACC TGCCGCTGTCGGTCCGCGTGGCCAATATCAAACCGATGCTGGCGGTGGCGCGCGACAACATGGACCTGACCAAGTACTTGGTCAGCGAAGTGATGCAATC GATGGAGCAACGCCTGGAATCGCTGCGCCGCTTCTATCCGGAAGCGAAAGCCGAAGACTGGCGTCTCGAAATCGCCGGCCAGCGCGTGCAGATCATCAAG AAAGACCCGAAAAAAGGCGGCGTGCTGCAATTCGGCACCGAGCTGGTCTCTGCGCAGGATGGCTCGCTGGCCGCCCTGCTCGGCGCTTCGCCGGGTGCGT CGGTGACTGTGTCGATCATGCTTGAGCTGCTCGAGCGCTGCTTCCCGGAGAAAACCCGCACGGAATGGGCGACCAAGCTCGAAGAGATTTTCCCGGCACG GGAGAAGATCCTCGAAACCGATGCGCCGCTCTACGAGCGCATCAGCGCGCAGAACGACGAGGCGCTGGAGCTGGTCGAAGAAAGCAGCCAGGAACACAGC TTCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGACTGCTGCTGTGCTGTAACAAAAAGCCCCGTGAGCCTTTAACAGCCACGGGGCTTTTTATTGCGTTTATTTCAGGCGCCGGTCAGAGGCTTCTGGA CAGTACGGCAATGTGCTCCGGGCCAATCCCGCAGCAGCCACCGATGTGCGTGGCGCCGCGCTTGACCCAATCTGCCGCCCACTGCTGATAGCCCTGCGGG TCAAGGTCTTCGCGCAGCTCGTCCAGGCCGTCGTTGGCGGTGGCGTCCTTGGGTTGCGGCGGGAAGGCGTTGGCGTACGCGCCGATGGCAATGTCGACGT TCAGCGACGTGAACACCTCACGGGCCGCATCGATTGCGCCACCGATCACCTCTGGCTGGCTGCAGTTGAACAGCAGCGTGGCGACGCCCATTGCTGCGGC AGCCCTGGCGGCGTCGGCGACCGGCTCGCCTGAGCGCAGACGCGGGACCTCGTCAGTGTCCTCATCCTGCAGAGTGAACGACAGCCAGAACGGTTTACCG
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| Amino Acid Sequence |
>Malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPGITLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPPAADGSIDIKKAVHINTQFEVSKQFWAYLARK GTFGSARSFINPVPHLSFVQGEKGVSFLKTRFEAMSKHHAFSSMEYTEDKATLAEWMPLMMPGRPADEKIAATRMMNGTDVNFGALTNQLLGHLTSAPGT QIKYRSRVTNLTRNGAGWTVSVKDVNGGGTREIDAKFVFLGAGGAALPLLQLSGIEESKGFGGFPVSGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSYLDLPLSVRVANIKPMLAVARDNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEIAGQRVQIIK KDPKKGGVLQFGTELVSAQDGSLAALLGASPGASVTVSIMLELLERCFPEKTRTEWATKLEEIFPAREKILETDAPLYERISAQNDEALELVEESSQEHS FA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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