Pseudomonas syringae pv. syringae SM, PssSM_0008 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004814 arginine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05746
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006420 arginyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05746
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 241 256 8.1E-34
Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. IPR015944 Glycine-tRNA ligase, beta subunit 3 683 25.066811
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 7 20 8.1E-34
Pfam PF02092 Glycyl-tRNA synthetase beta subunit IPR015944 Glycine-tRNA ligase, beta subunit 6 544 0.0
PANTHER PTHR30075 GLYCYL-TRNA SYNTHETASE IPR006194 Glycine-tRNA synthetase, heterodimeric 3 683 0.0
NCBIfam TIGR00211 JCVI: glycine--tRNA ligase subunit beta IPR015944 Glycine-tRNA ligase, beta subunit 5 683 0.0
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 389 408 8.1E-34
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 313 329 8.1E-34
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 334 486 7.46E-20
Coils Coil Coil - - 211 231 -
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 50 62 8.1E-34
Pfam PF05746 DALR anticodon binding domain IPR008909 DALR anticodon binding 579 671 2.9E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.