Pseudomonas syringae pv. syringae B64, PssB64_4684
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGGTTGCCAGCTACGACACCCGCAAGGTTGCACTGCTGGGTCTGAGCTTCAAGGCCGGCACTGACGATCTGCGTGAAAGCCCGCTGGTAGAGCTGGCC GAAATGCTGATCGGCAAGGGTTTCGACCTGAGCATCTTCGACAGCAACGTTGAATATGCACGCGTTCACGGTGCCAACAAGGACTACATCGAATCCAAGA TTCCGCACGTTTCCTCGCTGCTGAACTCGGACTTCGACCAGGTCATCAATGACTCCGACGTCATCATTCTCGGCAACCGCGACGAGCGTTTCCGCGCCCT CGCCAACAAGACCCCTGAAGGCAAGCGTGTCATCGATCTGGTGGGCTTCATGGCCAACGCCACTAGCGAAGACGGTCGTGCCGAAGGTATCTGCTGGTAA ATCAGCCGCAAGCCACAAGCGCCAGGCTCCAGGCCACAGGCTCAAGCAATGTGCTTGCAGCCTGGGGCTTGAGGCTCGCAACTGACTTAGGGATACGATT
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| DNA Sequence for Gene |
>PssB64_4684
ATGCAGAGGCTCAAGCACGGCCTGTTACAGGCCGCAGGTTGGCTGTTCTATTTAAGTTTACTCATGGGCCTTGCCGCGGCATTGCCTACCAGTATCTTCG ACTCACAGTCGAAGAACTTTATATTCCTGATTGGCGCCGTTGGTATCTGGCGCTACTCGATGGGGATCACGCACTTCGTGCGCGGGATGATTTTCCTGTA CATCGTTTACCCGCACTTGCGCCGCAAGGTTCGCAAGCTGGGCAGTGCAGCAGACCCGTCCCATGTGTTTCTGATGGTCACCAGCTTCCGCATCGACGCG CTGACCACCGCACAGGTCTACAACTCGGTTATCCGCGAAGCCATCGACTGCGGCCTGCCGACGACGATCGTCTGCTCGCTGGTGGAAATGTCCGATGAGC TGCTGGTCAAGAGCATGTGGGCCAAGTTCAATCCGCCAGAGCGCGTCAAGCTGGACTTCGTACGCATTCCGGGCACCGGCAAGCGCGATGGTCTGGCCTA TGGCTTCCGTGCCATCTCGCGTCACTTGCCCGACAGCCGCGCGGTGGTTGCGGTGATCGACGGCGACACCGTGCTCAACGAAGGTGTGGTCGCCAAGACC GTGCCGTGGTTCCAGCTGTTCGACAATGTCGGCGGCCTGACCACCAACGAGTTCTGTGAAGTGCGTGGCGGCTACATCATGAGCGAGTGGCACAAGCTGC GTTTCGCTCAGCGTCACATCAACATGTGCTCGATGGCCCTGTCCAAACGCGTGTTGACCATGACCGGTCGCATGTCGGTGTTCCGCGCAACCGTGGTAAC CGACCCCGAGTTCATTGCCGACGTGGAAAGCGACTCGCTCAATCACTGGCGTCTGGGCACCTTCCGCTTCCTGACCGGCGACGACAAGTCCAGCTGGTTC AGCCTGATGCGCCTGGGTTACGACACGTTCTACGTGCCGGACGCAGCGATCAATACCGTGGAACACCCGCCCGAGAAGAGCTTCCTGAAAGCCAGCCGCA AGCTGATGTATCGCTGGTACGGCAACAACCTGCGTCAGAACTCGCGTGCACTGGGTCTGGGCGTACGTCGCCTGGGGATCTTCACCAGCATCGTGCTGTT CGACCAGCGTGTGTCGATGTGGACCTCCATTCTCGGTCTGACCGTCGCACTGATCGCCAGCTTCAAGTATGGCGGCGCGTTCCTGTTGATGTATCTGCTG TGGATCGGCATGACCCGTCTGATCCTCACCCTGCTGCTGTCCCTGTCGGGACACAGGATCGGGCCTGCCTACCCGATCATTCTCTATTACAACCAGATCG TCGGCGCGCTGATGAAGATCTATGTCTTCTTCCGCCTGGACCGCCAGTCCTGGACTCGCCAGGACACCAAACTAAGCCGCGACATGGCCAGCTTTCAGGG CTGGTTCAACACGTGGTCGTCCCGAACCATGACTTTCTCGGCTGGCACCATCTTCGTCGCTGTGCTGTTGACGATGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGCCAACGGATTAATTGCTTAAGTAGGAAAAATAGCCATGAATACAGCCGTGAATGCGAACGTCGTACATGAATCCGAAGCCCAGCGCCAACACGCG CGGATCAAGATCCCTGCCAAGCTGCGCCTGCTGAATGATCAGCCTAACGCGCCACTGGTACGTGTCGAAGACCTGTCGGCCGGCGGCCTGAGCTTCGTTG CTCCGTCCGGGCAGAAATTCAGCGAAGGTCAGATCGTCAAGGGCCGCCTGCAATTCATCATCGACAACCTTGGCCTGGCCATGGACGTCGACCTGCAAGT GCGCTCGATCGACAACGCCAGCAACCGCATCGGTTGCCAGTTCCAGAACCTGGAACCGCAGGACATCGCTACCCTGCGCCACCTGATCACCTCGCACCTG TCCGGCGAAGTCGTGACCCTGGGCGAAGTGCTGGCCACGCTGCAGCGCGACAACTTCACCAAGGCACGCAAGGTCAAGGGCAAGGACAGCGGCATGAGCG
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| Amino Acid Sequence |
>glycosyl transferase
MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLIGAVGIWRYSMGITHFVRGMIFLYIVYPHLRRKVRKLGSAADPSHVFLMVTSFRIDA LTTAQVYNSVIREAIDCGLPTTIVCSLVEMSDELLVKSMWAKFNPPERVKLDFVRIPGTGKRDGLAYGFRAISRHLPDSRAVVAVIDGDTVLNEGVVAKT VPWFQLFDNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHINMCSMALSKRVLTMTGRMSVFRATVVTDPEFIADVESDSLNHWRLGTFRFLTGDDKSSWF SLMRLGYDTFYVPDAAINTVEHPPEKSFLKASRKLMYRWYGNNLRQNSRALGLGVRRLGIFTSIVLFDQRVSMWTSILGLTVALIASFKYGGAFLLMYLL WIGMTRLILTLLLSLSGHRIGPAYPIILYYNQIVGALMKIYVFFRLDRQSWTRQDTKLSRDMASFQGWFNTWSSRTMTFSAGTIFVAVLLTMV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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