Pseudomonas syringae pv. syringae B64, PssB64_4625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTGGGTGTGCTCTATGAAAGCTTCGTGCACCCGCTGACCATCATCTCCACCCTGCCCTCGGCAGGTATCGGCGCACTTTTGCTGCTGTGGATGATGGGG CAGGACTTCTCGATCATGGCTTTAATCGGCGTGGTATTGCTGATCGGTATCGTCAAAAAGAACGGTATTCTGCTGGTGGACTTTGCCCTGCAGGCCCAGC GCGAGCAGGGCCTCACCCCCCACGAAGCCATTTATGAGGCCTGCATCACCCGCTTCCGACCGATTATCATGACCACCCTCGCCGCGCTGCTCGGCGCGCT GCCGCTGATGCTCGGTTTCGGCGTCGGTTCCGAGTTGCGTCAGCCGCTGGGCATTGCCGTGGTCGGCGGCCTGCTGGTGAGCCAGATGCTCACGTTGTTC ACGACGCCGGTCATTTATCTGCAACTGGAGCGGTTGTTTCATCGACGTCACCCGGCGCCCGACGCACCGGCGCTGGCCCTGCACAAGTGAGAGTCGCCCG
|
|
| DNA Sequence for Gene |
>PssB64_4625
ATGCGCGTGCTGATTATCGAAGACGAAGAGAAAACCGCCGATTACCTGCGTCGGGGCCTGACCGAACAGGGCTATGCCGTGGACGTGGCGCGAGACGGGA TCGAAGGCCTGCACCTGGCGCTGGAGAATGACCATGCGATTGTCATTCTCGACGTGATGCTCCCAGGCCTGGATGGTTTTGGTGTGTTGCGTGCGTTGCG TGCGCGCAAACAGACACCCGTGATCATGCTGACCGCGCGCGAGCAGGTCGACGACCGCATTCGCGGCCTGCGCGAAGGCGCGGATGATTACCTGGGCAAA CCGTTTTCCTTTCTGGAACTGGTCGCCCGCCTGCAGGCCCTGACCCGGCGCAGCGGTGGCCACGAACCGGTGCAGATCACCATCGCCGACCTGTGGATAG ACCTGATCAGCCGCAAGGCGACCCGCGCCGGCCTGCGCCTTGACCTGACCGCCAAGGAGTTTTCGCTGCTCAGCGTGCTGGCCCGGCGTCAGGGCGACAT TCTCTCCAAGACATCCATCGCCGAGATGGTCTGGGACATCAACTTCGACAGCGATACCAATGTGGTCGAAGTCGCGATCAAGCGTTTGCGGGCCAAGCTC GATGGCCCTCACGAGCACAAGCTGTTGCACACCATTCGCGGCATGGGCTATGTGCTGGAGAACCGCAGTGCGGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCAATTGCCCTGCGCCTGAGCGGGCTGTTCGCGCTGGTGGCGCTGGTGGTCTTTCTGCTGATCGGCTGGGCCTTGTACCTTCAGGTCGACAAGAGCCTC GACCTGCTGCCCCGCGCGGAAGTGGATGCGCGCTACAGTGTGCTGGAATCGGCGGTCAATCGTTTCGGCAACCCGGAGCACTGGGGCAAGATCAAGACCA AGCTCACCTTGCTCAGTGAAGAGGATAAACGCCTGCGCTTCTGGGTGGTGAGTGACAATCCGCTCTACGAGTTCGGCAACCCTGGCGCTGACATTCGTCG TTTTGCGCAGGGGCCGCTGGGCATGCACGACCTGAAACTGGCGGATCACCCGTTTTCGTTTAAAGTGCTGGTCAGCGAGTTTCCCGCCAAGGAACAGCGC CCGGCACTGCGCTTTCTGACCGCCATCGACACCGAGACGTTCTGGCACACGCAGCACTCGCTGCTGGTCGCCTTGATCAGCCTCGCCACGCTGGGCATTC
|
|
| Amino Acid Sequence |
>transcriptional regulator
MRVLIIEDEEKTADYLRRGLTEQGYAVDVARDGIEGLHLALENDHAIVILDVMLPGLDGFGVLRALRARKQTPVIMLTAREQVDDRIRGLREGADDYLGK PFSFLELVARLQALTRRSGGHEPVQITIADLWIDLISRKATRAGLRLDLTAKEFSLLSVLARRQGDILSKTSIAEMVWDINFDSDTNVVEVAIKRLRAKL DGPHEHKLLHTIRGMGYVLENRSAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|