Pseudomonas syringae pv. syringae B64, PssB64_4497 (bcpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGCCTACATCGAGCTGCGCGTGAATGGCGAACGCGCCGTGCATGGTGTGGGCATCGATGAAAACATCACCACGGCGAGCTTCCGCGCCCTGTTCAGTG CTCTGAATCGTTCAATCAGTCAGACGCAAGCCAAGGCTGCCTGATTCGATAGCCGGATGGCGGACGCAGGTCCGTCATCCGCATCGCACTCTTCCCTCCC CGCCTCACGCTGCACCCACCTCTTGCATTCCGCGCATGACCCTGCCTGTTTCGGCATAATCTTTTTCATTTATGCTGTGGTAGCATGCTGCCCTTACTCC AGAGCGTGCCCAATCCAACAGCAATTCATATGCTGACGATGCCTGCTCGGACTTACCTGCCAGCTGCACCTTTCCTATAAAACCAAGACGACTATTGCAT TGATTTCCGGACGAAAAGAATGCTCGGGCAGACCCACCGTGCATTGAAATTACCATCGGCCTCGGTACGCTGAGCTGATCCAATCACATTTGGAGCGATT
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| DNA Sequence for Gene |
>PssB64_4497
|bcpA
ATGCCCAAGGCTTCCCATCAAGATTTGCGCCGCAGCTTCCGTGCGCTCACCTCGTCGAACGCTTGCTTTCACACAGCCTCGGTGTTCGACCCCATGTCAG CGCGAATCGCAGCGGATCTGGGCTTTGAAGTAGGCATCCTCGGCGGCTCCGTGGCGTCGCTGCAAGTCCTGGCAGCCCCTGACTTCGCCCTGATCACCCT GAGCGAATTCGTTGAACAGGCCACGCGCATCGGCCGTGTCGCACAGCTCCCGGTCATCGCGGACGCAGACCATGGTTATGGCAATGCTCTTAACGTCATG CGCACCGTTGTCGAACTGGAACGTGCCGGTATTTCTGCACTGACGATCGAAGATACCCTGCTGCCGGCGCAGTTCGGACGTAAATCCACTGACCTGATTT CCACTGCAGAAGGTGTTGGCAAGATCCGCGCAGCGCTGGAAGCGCGTGTCGATCCGGAGATGTCGATTTTCGCTCGCACCAACGCGGCAATCATTCCGGT TCAGGAAGCCATCAGCCGGGTTCAGCAGTACCAGGCTGCCGGGGCTGACGGTATTACCATCGTCGGCATTCGCGACTTCGATCACCTGGCGCAGATATCA GAAGGCGTGACGGTGCCGCTGATGCTGGTGACATACGGCAACCCGGAACTGCACGACAACGCGCGTCTTGCCGAGATGGGCGTGAGGGTCTGCGTGCATG GTCACGCGGCGTACTTCGCTGCGATCAAGGCCACCTATGACTGCCTGCGCGAGCAGCGTCAGATCCTGGGCAGCGAATCGAACATGAGCGCGACCGAACT GACCCACACCTATACGCAGCCTGAAGACTACGTAGAGTGGGCCCGCAAGTTCATGAACGTCAACGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGGCAACGCTGGACGCTGCGCCGCCTGATCAGGGGCGCAAGCAGCTGAATGCCCGCGCAACACTGTGCGCGGGCATGATGAGCGTCACTTCGGACGCAA AGCAGGCGATATCACGCGGTGGTGTTTACACCGCCACCGGTTTCCAGCTGCAGCAACGAGGCCTGCATCGTCTGCAGGTTGGCGCTGATGGTCGCGATCT GGCCCAGAATCGCCATAGATTTCTGAGCCTTTTCTTCCGCTGAGCCGTTACCGCTTTGAGCAGCAGCCAACTGCGCCTGCTGCTCGGCGAGTTGCTTCTG AGCGTCCTTGATCTGCTGCTTTATCTGTTCGATGGTCTGATTGAGCGACGATTCGCTGGAACCACCCACGCTGCCACCACCACCCGCCGCACCGGCCTTG CCACCTTCGGTGGACGCCTGATCAGAGCTTTTCTCTGTTTCAGTAGTCGTGGTGGCAGCAGCAGTCGCGGCCTTGGCTGTTTCAGCGTCAGTAGGTTTGA
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| Amino Acid Sequence |
>oxaloacetate decarboxylase
MPKASHQDLRRSFRALTSSNACFHTASVFDPMSARIAADLGFEVGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAQLPVIADADHGYGNALNVM RTVVELERAGISALTIEDTLLPAQFGRKSTDLISTAEGVGKIRAALEARVDPEMSIFARTNAAIIPVQEAISRVQQYQAAGADGITIVGIRDFDHLAQIS EGVTVPLMLVTYGNPELHDNARLAEMGVRVCVHGHAAYFAAIKATYDCLREQRQILGSESNMSATELTHTYTQPEDYVEWARKFMNVNE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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