Pseudomonas syringae pv. syringae B64, PssB64_4445 (wspA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCATACAGGCGCTGCAGCTCGGCGAGCTGATCAGGGCTGGACTTGCGTGCGCCTGCCAGCCATCGCAACGGGCGCCGAAGGGCTTTGCGCAAGGTTGCAT GGGTTGCCGGCGCTGCGTGAAGCAGCCACTCGGGGGATTTGTCTTTTATCAGTTGCAGATGCGGGGGCTCAGGAGCCTTGCCCGTCAGAGATAGATCCAG CATTTAAGTGCCTTGTCGTGAATGAACAGGCGACAAAGCTTACGGCCGCGACTTGCCGTGCAAGTGCTAACTATCTATGTACTCTCGCTGTTTCTGAAGA CCATTGCTCAAGTAGTGGTCGCGATGGCCGACAAGACATGAAGAAGGGTGAAAGAGCGGCGTTCGATAGCGGCCGTGACTTCATTTTGTATTACCCATGT AACGTTTGACGGCTGGGCTATACTCACGCCGTTTGGACCGTCCGTCGGTCCGCTTCTTGAACACGGCCCAACGCCGTCGTTGAACTCTTGAGGGCTGACT
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| DNA Sequence for Gene |
>PssB64_4445
|wspA
GTGAAGAACTGGACCTTGCGCCAACGGATTCTGGCGAGTTTCGCCGTCATCATCGCAATCATGCTACTGATGGTCGTTGTATCTTATTCTCGGTTGTTGT CCATCGAGTCCAGCGAGGAAGATGTACGTCTCGATGCGTTGCCCGGTGTCTACTACAGCACCTTGGTGCGCAGTGCCTGGGGCGAGAGTTACATCCGCAC GCTTGAGCTGATTGCCGAAGGGCAGGGGCGGCCGCTGACCAAGCAGGAACGAGACCAGTTTCAGGGCTTTGACGAAAACCTGCAGGCACAGATGGACGGC TACAAGAAGTCCATCTTCGATGATTCAGACAGAGACGGCTTCGCGATTTTCGAAAAGCGCCGCGAAGCCTATTCGCGCATGCTCCCCGAGGTTCACGCCA AGTACGATCGCGGCGACTACGCAGGCGCGCGTGCCGAGTTCTATGGCGAAGTCAATCCGGTCTGGCTCGCGGGCCGCAAGCAGCTCAATGAGCTCATCGT GGCTAATAAACAGCTGGCTGATCAGGCCACCGCCAACATTGTCAACGCCGTGCTGGCTGCCAAGATCAGCATGATCCTGTCGCTGTTGGTTGCTGTGCTG GCGGCTGCGGCCTGCGGTCTGTTACTGATGCGTTCGATCATGGCGCCAATGCAATTGATCGTGAGTATCCTGGACGTCATGCGCAAGGGGGATTTGAGCA CCCGTCTGAGCCTGTCGCGCAAGGACGAGTTCAATGCGGTCGAGACCGGTTTCAACGACATGGTCACCGAACTCACCGCGCTGGTTGCGCAGGCGCAGCG CTCCTCGGTACAGGTCACTACCTCGGTCACCGAGATCGCTGCAACGTCACGTCAGCAACAGGCCACCGCCACCGAAACCGCTGCAACCACCACCGAGATC GGCGCTACGTCGCGGGAAATCGCCGCTACCTCGCGGGACCTGGTGCGGACCATGACCGAAGTCACTTCGGCGGCAGACCAAGCGTCGGTTCTTGCCGGTT CCGGTCAGCAGGGCCTGGCACGCATGGAAGACACCATGCATCAGGTGATGGGCGCTGCCAATCTGGTCAACGCCAAGCTGGCGATCCTCAACGAGAAGGC CGGCAACATCAATCAGGTCGTCGTCACTATCGTCAAGGTCGCCGACCAGACCAACCTGCTGTCGCTCAATGCCGCCATCGAGGCCGAGAAGGCCGGTGAG TACGGTCGCGGTTTTGCAGTGGTGGCCACCGAGGTGCGTCGCCTGGCCGACCAGACTGCCGTTGCCACGTATGACATCGAGCAGATGGTGCGGGAAATCC AGTCGGCGGTGTCTGCTGGCGTGATGGGTATGGACAAGTTTTCCGAAGAGGTGCGCCGCGGCATGTTCGAGGTCACTCAGGTCGGCGAGCAATTGTCGCA GATCATTCATCAGGTTCAGGCGTTGGCCCCCCGTGTGCTGATGGTCAACGAAGGCATGCAGGCCCAGGCCACCGGCGCCGAACAGATCAACCAGGCGCTG GTGCAACTGGCGGATGCCAGCAGCCAGACCGTCGACTCACTGCGTCAAGCCAGTTTCGCCATCGACGAGTTGAGTCAGGTCGCGGTCGGGCTGCGCAGTG GCGTTTCGCGTTTCAAGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGATCAATGAGCGATCAATCGCCGAGGCGCAATGGCACGCCACTGACCGCCAGCAAGCTCTTTCTGCTGTTTTGTATCGGCGAAGACCGCTATGCACTG GACGCGACCGAGATCGCTGAAATTCTGCCGCGGGTAAAACTCAAGGCGATTGCCCAGGCACCACACTGGGTGGCGGGAATCTTTGCCCACCGCGGCGAGA TCGTCCCGGTGATCGACATCAGTGCGCTGAATTCCGGTCAACCGGCCCGCTCGCGGACCAGTACGCGCATGGTGCTGGTGCATTATCGCTACGACGACGC GCACCCGGCGCAGTTGCTGGGGCTGATTCTGGAACAGGCCACCGAGACGCTGCGCTGCCCTGTTGCGCAGTTCAAGGCGTACGGGCTGGACAATCGCCTG TCACCTTACTTGGGGCCGGTGCGTGAGGATGAGCAGGGCCTGTTGCAGTGGATTCATGTCCACGAGCTGTTGAGCGAGCCGGTCCGCGAGTTGTTGTACC
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| Amino Acid Sequence |
>Methyl-accepting chemotaxis protein WspA
MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLSIESSEEDVRLDALPGVYYSTLVRSAWGESYIRTLELIAEGQGRPLTKQERDQFQGFDENLQAQMDG YKKSIFDDSDRDGFAIFEKRREAYSRMLPEVHAKYDRGDYAGARAEFYGEVNPVWLAGRKQLNELIVANKQLADQATANIVNAVLAAKISMILSLLVAVL AAAACGLLLMRSIMAPMQLIVSILDVMRKGDLSTRLSLSRKDEFNAVETGFNDMVTELTALVAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQVMGAANLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINQAL VQLADASSQTVDSLRQASFAIDELSQVAVGLRSGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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