Pseudomonas syringae pv. syringae B64, PssB64_4436
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTGCAGGTGATGATTTTCGAAGAGCTGGTCGAGCACAAGCTGGAACAGCCGCACTTCATTACCCAGTACCCGTTCGAAGTGTCGCCGTTGGCGCGTCGC AATGACGAAAACCCGAACGTCACCGACCGTTTCGAGCTGTTCATCGGCGGTCGCGAAATTGCCAACGCCTACTCCGAGCTCAACGACGCCGAAGATCAGG CCGAACGCTTCCAGGCGCAGGTGGCCGACAAGGATGCCGGTGACGACGAAGCCATGCACTACGACGCCGACTTCGTCCGTGCGCTGGAGTACGGCATGCC GCCGACGGCAGGCGAGGGGATCGGTATCGACCGGTTGGTGATGCTGCTCACCGACTCGCCGTCGATCCGCGACGTGATTCTCTTCCCGCATATGCGCCCG CAAGCGTAATCAGTGTTAAAACAGCCGCCTTCAATGGGCGGCTTTTTTTTAGGTGTTTTTCAGATCGACTCATTTCAGAGCGACTTATAAGGAAGCTGTC
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| DNA Sequence for Gene |
>PssB64_4436
GTGACGATTGCCAGAGAAGGGGCCGCCGGAGTAGCGAGCGCGGTGGCCAAAAGTGTCAAGTATCAGGGCCGCAAGGCCGCGCGCGAGGGCAGTGAGCAGC GCAGGCAGGTCATTCTCGATGCCGCCATGCGTATCGTGGTGCGTGACGGCGTACGCGCCGTGCGCCATCGCGCAGTGGCCGCTGAAGCCAGTGTGCCGCT GTCGGCAACCACCTATTACTTCAAGGACATTGATGATCTGCTGACCGATGCCTTCGCCCAGTATGTACAGCGCAGCGCTGACTATCTGGCGCGGCTGTGG CAGAACACCGAAGGCATTCTGCGCGAAATGATGAGCCGCAGTTCCGGTAGTCCGACCGACCGTTTTCGTCTGGCGGACGACATCGCGCGTATGGTGATGG AGCACATCCGCCATCAACTGCTGACCCGGCGTGACTATCTGATCGCCGAGCAGGCGTTCTACCACGAAGCACTGATCAACCCGCGCCTTACGCCATTGGT CATGGCCCACCAGGAAATTTTGCTGCAAGGCAGTTGTCAGTTTTTCCAGGTGCTCGGTTCCCTGCAGCCCTATCAGGATGCTCAGGTGTTGACGGGGCTT ATCCGTCGCATTGAGTATCAAGGCCTGCTGCATGGGCCGCAGCGTCAAGCCGACGAAGAAATGCTCTGTATCCTGACCCGGCAGATGCGTCTGGTCCTGG GGACCCCGCAGCCGCTTCGAGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTATACTGCTGCGCGAGTGCCCCGGATCGGCTGTTCAGACGGTTTGACGATCCTGCCAGTTTCGATATTTTTCCAGCGGTGGCGTGTTGTTCCGCGCCGC CAAGCAGTAGCGTGACAGCCAGCCAAGGAGTACCGGTGGACGAGTATCAACAGACTATTCGTGCTTTATCGGATCGGATCGTCGTTGCACAGACGCCGAT TCGCATTCTGGATGCAGTTAAATGGGATGAGAACGTCCGCAAGGAGTTTCTGGCCGCCAAGGGCAAGGCGCTGCCTGCCGTGGACCGCGCCTATTACGAA AACCGTCCGCTGGGTTTCGACTCTTCCGCCTTGAAGCAAGAGTTTCAGAACATCGAGCGGGACGTCACGCGTCAACTGGGGCAGTTCAACCCGGTCGGGC AGATCATGCGCCGCATGTGCCGTGAGTACCGCATGGTGGTGCGTATGCTTGAGGCACGCGGTACGTCTGACTTCGGGCTGATTTCTCAGGAATTGTACGG
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| Amino Acid Sequence |
>TetR family transcriptional regulator
MTIAREGAAGVASAVAKSVKYQGRKAAREGSEQRRQVILDAAMRIVVRDGVRAVRHRAVAAEASVPLSATTYYFKDIDDLLTDAFAQYVQRSADYLARLW QNTEGILREMMSRSSGSPTDRFRLADDIARMVMEHIRHQLLTRRDYLIAEQAFYHEALINPRLTPLVMAHQEILLQGSCQFFQVLGSLQPYQDAQVLTGL IRRIEYQGLLHGPQRQADEEMLCILTRQMRLVLGTPQPLRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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