Pseudomonas syringae pv. syringae B64, PssB64_2839

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCTGGCATAGCGGCTAATTGTCGAGTGGTGTCCGACAACTAGCTGTTATTACTCATCCCGTTTTGCTCATGCGCCACACCACAGGGTTTGATCGAAACC TGCTGCCTCTGTCTTACACCCTGGCCATGCAAAAAAGACCGCCGTCGCGGCTCCAGAGCCCTGGAAGGTCAGCATGCTTGCGCCTGTTTCCTTAACCCAT AGTCATTTTATTAGTGTGTCTGCGGCCTTGAGCCGAGCCGGTTTTCGCGTGCTAGCCGATCAGCATTTCTGCATATATTTAATTATGACCTTAATACTAT GTCGAAAAGATACGCTGTCCCCTATCAATATTAAGCACATGACCCTTGAGCGCTGGCTAAAGGTCAGTGTTGTAAAAATCAGCTTCAAAAAAAGTTCAAC AAATCGGATACAAGGTCGATACAAATATTTGACGCCGCTATGATGGCGTTCTAGTATTGCCCACCTTTTTGATATCAATATGCTACCGCAAGGACGCGCC
DNA Sequence for Gene
>PssB64_2839
GTGTATCCTCATGCCCTAAAACTGGCTTTGCTGCTACTGCTCGCCATCGCGCCAGCTACCTCGCTTGCAGCCACTGCTCCCGCCAGTTTGCCAGGTGACC AGGATCTTATTCGTGACCGTCAGGATCGCCTGCTCGAAGAGCAGCGCCGCCGCCTTGAAGAACTCAAGGACCTGCCGGGCAAACAAACCGCACCCGCTGC CCCGAGTTCTCCGGCCGATACACGTTGTTTCACCATCAATCGTATTGAGCTCAAGGGCGCCGACTCGCTGTCGGCCGCCGAGCGCGATGCGTTGACCAAG CCCTATATTGGCAAGTGCCTTGGTGTTGCGCAGCTCAATGAGCTGCTTAAAGTCATCACTGATCACTACCTCGAAAAAGGCCTGGTGACGACCCGCGCCT ACCTGCCGCAACAGGACCTGTCGACAGGCGACCTGCAAGTGCTGGTCATCGAAGGCAAGCTGGAGCATCTGCGTGGCGATGCCGCCAGCGGCCTGTCGGA GCGTGAGCTGGCCATGACGTTTCCCGGCAGGGAAGGCCAGATGGTCAACCTGCGCGAAATCGAGCAGATGGTCGATCAGCTCAATCGCCTGCCGTCCAAT CAGGCGCAGATGGAGCTGACCCCCGGTAAGGCCGTCGGTGGCAGTGACGTAGTGGTCAAGAACACTCCGCAAAAACCATGGCGGGCCAACCTGTCGCGTA CCAACGAAGGTCAGCGCAGCACCGGCGAGCAGCAATGGAACGCTGGCCTTGAGTGGGATAATCCGTCGGGGCTGGCCGACCAGTTCAGCCTGCGCGGCGG CCACGATGCGATCAGCGATCGGCAGAAAGCCTCCCGCAACGCCTTGCTTGCCTACAGCCTGCCGTGGGGATGGTGGACGTTCAGCTACCTGTACAACACC AGTGAATATCGTTCGGTGGCGCAGGCCTCGAACGTCAACTTCAAGCAGGACGGCGATAGCCAGAACCACCAGTTCAAGGCCGAGCGGGTCGTGTATCGCG ACGCGCTGAGCAAGACCTCGCTCAATGCCGGTCTGTCCTACCTGCGCACCAACAATTATGTCGAAGGCAGCAAGCTGGCAGTCAGCAGCAATCGCATCAC CGAGGCGCAGTTCGGCATCAACCACGGTCGGCGGGTCGGCTCGGCGTTCGTCAACATCGATCTGGGCATGCAGCAAGGCATCGGTGCACTGGACGCGCAG GGCAACCACGATCCTCGCCCGGGTGAGGCCGATGCGCGGTATCGCAAATACACCGGCACCCTCAGCTATCTGCATCCCTTTCAACTGTGGGGCGAAAACC TCAGCTTCACCAGCCTGGCCACCGGGCAGCGCAGTGAGGATGTGCTGTTCAGTTCGCAACGCACCAGCTTGGGCGGATCGGCATCGGTGCGCGGTTACAA GGATGAGTTTCTGTCTGGCGACAGCGGTGGTTACTGGCGTAACGAGTTGCGCCTGACTCGCCCGGTCACCCTGGACTGGCTGCGCCCGGTGTTCGCCGAG TATGGCGCGGCTGCCGGTTACGACCAGGGTGTTATCCGCAACGATCGTTACAACGGCAATCAGCATGGGCGCTTGTCCAGTAACTCGTTCGAGCTGTTTA CGCGTGGCCAGCACGTTGCTGCCTCAGTGACGTTCGCTCATTCCCTGGAACGTCCCGATGTGATCGAGCGCGAAGCGCCGATCTATTTCCGTATGGACTT CTTTCTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGCGCCGTTTTCAACCTACCTGTTTCGAGGTCATTTACATGGACGTCCACCAACTGGCTCTGCTTGCTCGTCAGCCTTCTGCTGTGCTGGTCGAGCGCC GGTCTTTCTGGGGAATGCCCAAGCGCGGCCTCGCGCTGATTCTCGCCAATGCGATGTTCTGGCAGCCGATGCTGGTTCAAGCCGAAGGCATCGTGGTCAG CGGCACGAATACCAGTCTGAACCAGGCCGGCAATGGCGTGCCTATCGTCAACATCGCCGCGCCTAATGCCAGCGGCCTGTCACACAACCAGTATCAGCAG TTCAACGTCGACAGCCAGGGCGTCATCCTCAACAACTCCACCAACCAGACCCAGAGCACCCAACTGGGCGGCATCATCGTCGGCAACTCCAACCTGCGCG GCACGGCGGCCAGCACCATCCTCAACGAAGTGGTCGGGGCCAACGCCAGTCAGCTCAGGGGCTATACGGAAGTGGCCGGGCAGGCGGCGCGTGTCATCGT
Amino Acid Sequence
>Adhesin/Hemolysin activation/secretion protein, FhaC/HecB/ShlB family
MYPHALKLALLLLLAIAPATSLAATAPASLPGDQDLIRDRQDRLLEEQRRRLEELKDLPGKQTAPAAPSSPADTRCFTINRIELKGADSLSAAERDALTK PYIGKCLGVAQLNELLKVITDHYLEKGLVTTRAYLPQQDLSTGDLQVLVIEGKLEHLRGDAASGLSERELAMTFPGREGQMVNLREIEQMVDQLNRLPSN QAQMELTPGKAVGGSDVVVKNTPQKPWRANLSRTNEGQRSTGEQQWNAGLEWDNPSGLADQFSLRGGHDAISDRQKASRNALLAYSLPWGWWTFSYLYNT SEYRSVAQASNVNFKQDGDSQNHQFKAERVVYRDALSKTSLNAGLSYLRTNNYVEGSKLAVSSNRITEAQFGINHGRRVGSAFVNIDLGMQQGIGALDAQ GNHDPRPGEADARYRKYTGTLSYLHPFQLWGENLSFTSLATGQRSEDVLFSSQRTSLGGSASVRGYKDEFLSGDSGGYWRNELRLTRPVTLDWLRPVFAE YGAAAGYDQGVIRNDRYNGNQHGRLSSNSFELFTRGQHVAASVTFAHSLERPDVIEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site