Pseudomonas syringae pv. syringae B64, PssB64_2439 (fliG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAATGGCGAAGTCAGCCGTGCTCCGTGGAGCGCGGCGGATCTGGCGCGCTTCACGCGGCTGGTACAGGATGCCGTCGGTTTCGATGCCAGCCGCGGTGAC AGCGTCAGCGTAATCAACGTGCCGTTCTCCAGCGAACGCGCTGAAGTGCTGCCTGAAGCGTCGTTCTATTCGCAACCCTGGTTCTGGGACATCGTCAAGC AGGCTGTTGGCGTGATCTTCATCCTGATTCTGGTGTTCGGTGTGCTGCGCCCGGTGTTGAACAACATCACCAACGGCAAGCGCAAGGAACTGGCAGGTTT CGGTGGCGACGCCGAGCTGGGTGGCATGGGCGGTCTGGACGGCGAATTGTCCAACGATCGCGTAAGCCTGGGCGGTCCGCAGAGCATTCTGCTGCCGAGC CCGACCGAAGGCTATGACGCACAGCTGAATGCAATCAAGAGTTTGGTGGCTGAGGATCCTGGCCGTGTGGCTCAGGTTGTGAAAGAGTGGATCAACACTG
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| DNA Sequence for Gene |
>PssB64_2439
|fliG
ATGAATGAACGAGCCATGGTAGCCAAACTCTCCAAAGTTGAAAAAGCGGCTGTACTGTTGCTCTCGCTGGGCGAAACCGATGCGGCGCAGGTGCTCCGGC ACATGGGCCCCAAGGAAGTCCAGAAAGTGGGCGTAGCGATGGCGCAGATGCGCAATGTGCATCGCGAGCAGGTCGAAGAGGTCATGAGCGAGTTCGTCGA CATCGTTGGCGATCAGACCAGCCTTGGCGTCGGTTCCGACGGCTATATCCGCAAGATGCTGACTCAGGCACTGGGCGAGGACAAGGCCAACGGCCTGATC GACCGGATCCTGCTGGGTGGCAATACCAGCGGTCTGGACAGCCTCAAGTGGATGGAGCCGCGTGCCGTTGCCGACGTGATCCGTTTCGAGCACCCGCAGA TTCAGGCCATCGTGGTCGCCTATCTCGACGCCGACCAGGCGGGCGAGGTGCTTGGGCATTTCGATCACAAGGTCCGCCTCGACATCATCCTGCGCGTGTC GTCGCTCAACACCGTACAGCCAGCGGCTCTCAAGGAGCTGAACCAGATTCTCGAGAAGCAGTTCTCCGGCAACGCCAACACGTCGCGTACCACACTGGGT GGTATCAAGCGTGCGGCCGATATCATGAACTTCCTCGACAGCTCGATCGAAGGTTCACTTATGGATTCGATCCGCGAGGTCGACGAAGACCTGTCGGTGC AGATCGAAGACCTAATGTTCGTCTTCAACAATCTTTCCGATGTGGACGATCGCGGTATCCAGGCGCTGCTGCGCGAAGTATCCTCGGACGTGCTGGTACT GGCCCTCAAGGGCTCGGACGAAGCGATCAAGGAAAAAATCTTCAAGAACATGTCCAAGCGTGCCTCCGAGCTGCTGCGCGACGACCTGGAAGCAAAAGGT CCGGTGCGTGTCAGCGATGTGGAAACCGCCCAGAAAGAAATCCTCACCATCGCGCGTCGTATGGCCGAGGCCGGCGAGATCGTACTCGGTGGCAAGGGTG GCGAGGAAATGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGATTCAGCCGACTCATGTCCAGTTCCAATAAAGAATCGGCCAGCGACCTCATTCGCGCCAAGGACGCCGGGTTGCTCGATATCTGGGCGTTGCCCAGCT TCGATCCGCACGTCGAGCCCGAACCTGAACCGGAGCCCGAGCAGCTCGACGAACCGGCCGAGATGGAAGAAGTGCCGCTGGATGAAGTCCAGCCACTGAC CCTGGAAGAGCTGGAAAGTATCCGCCAGGAGGCCTGGAACGAAGGCTTTGCCACCGGTGAAAAGGAAGGTTTCCACAGCACTCAACTAAAAGTGCGTCAG GAGGCTGAGGTTGTTCTTGCGGCAAAAGTCGCCAGCCTGGAACAACTGATGAGCAACCTGCTGACACCTATCGCCGAGCAGGACACCCAGATCGAGAAGG CCGTCATTCATCTGGTCGAGCACATCGCGCGCCAGGTGATTCAGCGTGAACTGGTTACCGACTCGGCACAGATTGCCAGCGTCCTGCGCGATGCCCTCAA
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| Amino Acid Sequence |
>flagellar motor switch protein FliG
MNERAMVAKLSKVEKAAVLLLSLGETDAAQVLRHMGPKEVQKVGVAMAQMRNVHREQVEEVMSEFVDIVGDQTSLGVGSDGYIRKMLTQALGEDKANGLI DRILLGGNTSGLDSLKWMEPRAVADVIRFEHPQIQAIVVAYLDADQAGEVLGHFDHKVRLDIILRVSSLNTVQPAALKELNQILEKQFSGNANTSRTTLG GIKRAADIMNFLDSSIEGSLMDSIREVDEDLSVQIEDLMFVFNNLSDVDDRGIQALLREVSSDVLVLALKGSDEAIKEKIFKNMSKRASELLRDDLEAKG PVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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