Pseudomonas syringae pv. syringae B64, PssB64_2092
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGGTGCTTGTTCAACATGGCCAAGCGCGTACCCGGAGCACTGCTGCGCAGCCTGCCGAGCGACGGCCATATCAACGCGATGGTCGCGTAGTCGCTGGC AGCGACGCGCCAGGTGTGATCGGCCGTTGCCGGATCGAAATCCCGGCCGGGCAGTAACGCAGACTCCAGCGCTGCAAGTGCCTGACGGAGTGGTTCGCGC AGTTCTTCAGCCCGCGCGGTTGGGGTCATGCCCCGCGGTCCCGGCAGCAACAATGGATCCTCCAGCACCTGCCTCAGCCTGCCCAATTGCAGGCTGACGG TGGGCTGGGTCAGGTTCAGCCGATGCGCCGCGCGGGTGACGTTCTGCTCCGAGAGCAATGCATCCAGCGTGACCAGCAGATTGAGGTCGATACGCCGCAA GGTATTGTTCATGCACATACCAAGTGTTTGGGAGATTGATTTCCAGCATACCCGATCGAGTCTGTAGCGTTGCCTCATGACAGACAAACCGGAGCCCCTC
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| DNA Sequence for Gene |
>PssB64_2092
ATGAACGTACTTATTGTCTACGCCCACCCAGAACCGCGCTCGCTGAACGGGTCGTTGAAAGACTTCGCCGTCGATCATCTGCAGAACAACGGCCATCAGG TGCAGGTGTCCGACCTTTACCAGATGGGCTGGAAGGCGATCATCGACGCCAACGATGCACCCGGTCTTGAGAACAACCGCCGCTTTGACCCTGCCCTTGA GTCGCAACGCGTATTTGCCGCCGGTATTCAGCCGCCGGACATCGAGGCCGAACAGGCCAGATTGCTCTGGGCAGACGCCGTCATATTCCAGTTTCCGCTC TGGTGGTTTTCGATGCCCGCGATCATGAAAGGCTGGATAGAGCGGGTGTACGCCTGTGGTTTCGCCTACGGCGTGGGCGAGCACAGCGACCAGCACTGGG GTGATCGATACGGTGAAGGAACGCTGGCAGGCAAGCGCGCCATGCTGGTGGTGACCATGGGCGGCTGGGAGTCCCACTACAGCGAACGTGGCGTAAACGG AGCGCTGAACGACGTGCTCTTTCCTATCCAGCACGGCATCCTGTTCTATCCAGGTTTCGATGTGCTCGCGCCCTTCCCTGTGTACCGGGCAGGCAAAGTG GACAGCGCAACCTTTGCGCAGATTTGCGCCGACTACGGCGACCGCCTGGATAACCTGTTCACCCTTGAGCCCTTGCCCTTTCGCAGGCAGAACGACGGCG ACTACGAGATCCCGGCACTGACATTGCGAGCGGATCTTGCACCGGGTCGGCAGGGGCTGGACATTCACCTGCGCGATCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGATAAAGAAAAGACCCTGCTTGTGCAGGGCCTTTTCATACGTATTGTCTTCCGGCGGATTACTTCAGGTTGTTCTTGAAAAACTCGCCCAACTTGTCG AACGGGATCAGATCGACCCGATCATACAGATCCACATGCCCGGCCTCCGGCACGATGATCAATTGCTTGGGCTGGCCGGCCAGTTTGTACGCTTCCTCGC TGAACTCCAGAGAGTGCGCCTTTGAACCGGCGATGAACAACATCGGGCGTGGCGAGATGGTCGCGATGTCGTTGAACGGATAGAAGTTCATGAACTTGAT GTTGCTGGTCAGCGTCGGGTGAGTGGTCAACTCGGGGGACTGGCCTTCGGGCGTGAACTCGCCCCGTGGCGTGCGATAGAAATCGTAGAACTCGCGTTCG ATCGGGCCGGATTTTTCAGTCAGTTTGTGTACGGTGCCGCTGGTATACTCGGTGTCGCCGCCGCTGTATTCCACGTCGCGCTGCAGTGCCGCCTGCTCGA
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| Amino Acid Sequence |
>NAD(P)H dehydrogenase (quinone)
MNVLIVYAHPEPRSLNGSLKDFAVDHLQNNGHQVQVSDLYQMGWKAIIDANDAPGLENNRRFDPALESQRVFAAGIQPPDIEAEQARLLWADAVIFQFPL WWFSMPAIMKGWIERVYACGFAYGVGEHSDQHWGDRYGEGTLAGKRAMLVVTMGGWESHYSERGVNGALNDVLFPIQHGILFYPGFDVLAPFPVYRAGKV DSATFAQICADYGDRLDNLFTLEPLPFRRQNDGDYEIPALTLRADLAPGRQGLDIHLRDQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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