Pseudomonas syringae pv. syringae B64, PssB64_1988
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGGCTCGGTCCGATGGCCGGTCAGAATCATCACTTCAATCGTTTCGCCAAGGAAAAGATCCCCTACGCGATCGAGCGCTACGTCAAAGAAACCGCAC GACTGTATGACGTACTGAACAAGCGTCTGGCCGATCGCCAGTTTGTGGCGGGTGACGAGTACAGCATCGCCGACATGGCGATCTACCCATGGATCGTGCC GCACACCTATCAACAGCAGAATCTGGACGACTTCCCGCACCTCAAGCGCTGGTTCGACAGCATCGCCGGTCGCGAAGCGACACAACGCGCGTATGCGCTG GTCGAGAAGATCAACCCGTCGAAGCCTTGAGTCCCCTTGGACTCAAATGGCGACTCTTGTGCCTGCGCTGAGCAATGGCACAAGAGCCGTCTGGTCACTT CTGCAAAATCCTGAAATAAACTCGCCCTTCCCGCTTGCGCGCTGGCGGGCTGCTCTCTAACGTAGCGGCTTTTGTACGTTACCCCTCCAGGAGCTTGCCC
|
|
| DNA Sequence for Gene |
>PssB64_1988
ATGGCCTCGCCAGCCCTTCGTCATTTTCTACCCCGATTCGGCGCTGCCGCCGCTGCGGCGAGCTTCCTGAGCCTTGCCGGCTGCCAATTGGGCGGCGGCG ATCCCGAGACCGTGCTGCCTGTTTCCGGGACATTCCCGCTCAAAGGGCTGGCGCAAAATGTTTCGGTGCGCCGCAACACGATGGGCATGCCGCTGATAGA AAGCAGCAGCTACCACGATGCGCTGTTCACGCTGGGCTACGTTCATGCCGGTGATCGAATCAGTCAGATGCTCGGCATGCGCCTGCTGGCGCAGGGCCGT TTGTCGGAAATGGCCGGCGCGGATGCGCTGGACGTCGACCGCCTGATGCGCTCGGTGAACCTCAAGCAGAACGCCAGCGACCTGTACAACGCCGCGTCGC CACGCTTGAAACGTTTCTTCGATGTCTATGCACGCGGTGTGAACGCCTACCTGTTCCGTTATCGCGACAAGCTGCCTGCCGAGATCGCCAGTTCGGGCTA CAAGCCAGAATACTGGAAGCCGGAAGACTCGGCGCTGATCTTCAGCCTGCTCAATTTCAGCCTGTCGGTAAACCTGCAGGAAGAGCTATCGGCGCTGGTT CTGGCGCAGAAAGTCAGCGCGGACAAACTCGCCTGGCTGTTGCCGACCTACCCTGACGAAGAATTACCATTTGCCGAAGCCGACAAGCTCAAGGGCCTGA ACCTCAACAATCAGGTCACCGGCCTGAGCGATCTGAACAGGATCGCCCTGCAGCTCTCGGACCTGAACATGCTCGGCGTTGCGGCCTCCAGCAACTGGGC CATCGCGCCACAACGCAGTCGCAACGGCAAAAGTCTGCTGGCCAGTGACATGCAACTGCCTGCCGGGCTCAATTCTGCCTGGAGCTTCGTGCAGATCCGC GCACCGAAATATCAGGTGTCCGGCGTCACCATCGCTGGCATGCCGCTGGTGCTCAGCGGTTTCAACGGCAAGCTGGCGTGGAGCATGAGCAGCGTCAAGG GCGACAACCAGGACCTGTTTCTGGAGAAGATCAAGCGCGAAGGCAACCGCGTCTCCTACATGGCTGACGGCAAATGGGTGCCAGCGGCGGCGCATCAGGA AACCTTTCTGGTCAAGGGCGGCAGCCCGCTGCGTGAAACCGTGTATGAAACCCGCCACGGCGCGCTGCTCAATGCTTCTGCAACCCCGCCCGGCAACGGT TTGAGCCTGGCGCTGCAAGTCCCGAACTTCAAGGACGACAAGAGCCTGGATGCATTCTTCGATCTGTCCCGTGCGCCCAACGTCGAGAAAGCCTTCGATA CCAGCCGCGAGATTCGGGCGATCACCCTGAATATGATCTTTGCCGACGCCTCGAACATTGGCTGGCAGGTCACCGGTCGCTTCCCGAACCGCCGTGAAGG CCAGGGTCTGCTGCCTTCGCCGGGTTGGGATGGCAAGTACGACTGGGACGGTTTTGCCGACTCAATGCTCCACCCTTATGATCAGGACCCGCGCCAAGGC TGGCTCGCAGCGGCCAATCAGCGCACGATCCCGAAAGGCTACGGCATGCAGCTCTCCAACTCGTGGGGCTACCCGGAGCGCGCCGAGCGGATTGCCGAAC TGGCCAACGGCGGCAAGCAGGACCTGCGCAGCACCATCGCCATGCAATACGACCAGACCACGACGTTCGCCGCCAAGCTCAAGACCTTGTTCCAGGCGCC CGGCATGAGCAAGCCGCTCAAGCAGGCCATCGATGCCCTGCCCGAAGCCGATCGCAACAAGGCCCGCGAAGCGTTCACGCGCCTGATGGCGTTCGATGGC AAGCTCAGTGCTACCTCGGCCGATGCGGCGCTGTACGAGCTGTTTCTGCAGGAAAGCGCCAAGCAGATTTTCCTTGATGAATTGGGTCCGGAAACCAGCC CTGCCTGGCAGGCACTGGTGGCCAATGCCAGCTCATCCTACTCACCACAGGCCGACCATCTGTTGGGGCGCGATGACAGTCCGTATTGGGATGACGTTAA AACCCCGCAGAAGGAAGACAAACCGGCCATCCTCGCGCGCAGTCTGGCGGCTGCCATCACCAGTGGCGACAGCCTGTTGGGCAGCGATCACAAGGCCTGG CAATGGGGCAAACTGCACCGTGACAACTGGGTCTCGACCAGCCCGCTGGCCAAGCAGTTGGGTGGCGGCGAGTTCAACCGTAGCGCCACACCAGCGGGTG GTGATCACACGACGCTGAACGTGTCCGGCTTCGAGTGGGGCAAGGGCTTCGACGCCCGCATGGCCCCCGGTCTGCGCATGATTGTCGACTTCAGCCTGGT CGAACCGATGACCGGCCTGATCAGCACCGGCCAATCCGGCAACCCGGCCAGCCCGTATTACGCCAACAGTATCGAGCCGTGGCAGAAAGGCCAGTACCAG TCGATTCCGGTGCAACAACAGAACTACGAAAAGGGCTACGGCAAGCAACGCCTGACGCTGACACCGGGCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCGAAAACCGGACGCAGCGGTTTTTCTTTGTCAGGTAGATTGGGGTTCGGCTTGAGTCATCAATGTCCGGAAGAAACACCATCGTGCATAAAAGCGC TTTTCTGTCGCGATGGCACTGACGACGCAGAGTGCGACGTAAGTGACGGCTGAGTCCTGGCGCTGATCCGGGGGTAGCCTGGCAGGACGCCAGGCTAGCC GCACCGGACCATGGATGGTCCGTTGCGGCGACCCCCGGATCAGTGGCAGGGCGAAGGAACCCGACGAAGTCGGGCCGGAAACGGAGCCAGGGGGTTTGGT TACTTTGGCCCCATCAAAGTAACTCGCCGAGGGGCGAAAAGGTGACTTGAGCCGAACCTCAATCCACCTGACATCGCAGAACCCCTGTGTGACGCGGAGC GTCACGAACTGCATTCCCACGCGGAGTGGTATGACCCCCGAAGGTTGGATACAACCTTTGGAGGCATCATGGGTAGATATACAGAACAGGCAAAACTCGC
|
|
| Amino Acid Sequence |
>Penicillin G acylase (PGA) family protein
MASPALRHFLPRFGAAAAAASFLSLAGCQLGGGDPETVLPVSGTFPLKGLAQNVSVRRNTMGMPLIESSSYHDALFTLGYVHAGDRISQMLGMRLLAQGR LSEMAGADALDVDRLMRSVNLKQNASDLYNAASPRLKRFFDVYARGVNAYLFRYRDKLPAEIASSGYKPEYWKPEDSALIFSLLNFSLSVNLQEELSALV LAQKVSADKLAWLLPTYPDEELPFAEADKLKGLNLNNQVTGLSDLNRIALQLSDLNMLGVAASSNWAIAPQRSRNGKSLLASDMQLPAGLNSAWSFVQIR APKYQVSGVTIAGMPLVLSGFNGKLAWSMSSVKGDNQDLFLEKIKREGNRVSYMADGKWVPAAAHQETFLVKGGSPLRETVYETRHGALLNASATPPGNG LSLALQVPNFKDDKSLDAFFDLSRAPNVEKAFDTSREIRAITLNMIFADASNIGWQVTGRFPNRREGQGLLPSPGWDGKYDWDGFADSMLHPYDQDPRQG WLAAANQRTIPKGYGMQLSNSWGYPERAERIAELANGGKQDLRSTIAMQYDQTTTFAAKLKTLFQAPGMSKPLKQAIDALPEADRNKAREAFTRLMAFDG KLSATSADAALYELFLQESAKQIFLDELGPETSPAWQALVANASSSYSPQADHLLGRDDSPYWDDVKTPQKEDKPAILARSLAAAITSGDSLLGSDHKAW QWGKLHRDNWVSTSPLAKQLGGGEFNRSATPAGGDHTTLNVSGFEWGKGFDARMAPGLRMIVDFSLVEPMTGLISTGQSGNPASPYYANSIEPWQKGQYQ SIPVQQQNYEKGYGKQRLTLTPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|