Pseudomonas syringae pv. syringae B64, PssB64_1926
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATATGGGCGAGGGCGGGGCGCTGGTGGCGATTTCCTCGATTGCCGGTGGTGTGTATGGCTGGCAGGACCATTCCCATTACGCAGCGGCCAAGGCCGGCGT GCCAGGGCTGTGCCGGTCACTGGCGGTGGAGCTCGCTCCGAAGGGCATCCGTTGTAACGCGGTGATTCCCGGCCTGATCGAAACACCGCAATCGCTGGAC AGCACGAACTCGCTGGGGCCGGAAGGTCTGGCGCAGGCGGCCAAAGCCATCCCCCTGGGCCGGGTCGGCCGAGCGGATGAAGTCGCTGCGCTGGTGCGTT TTCTGTGCAGCGATGAAGCCAGTTACCTGACCGGACAAAGCATCGTGATCGACGGCGGCCTGACCGTGCGCTGGCCCGAGTAGATCGATTCGGATCGGCA GCGAGCCTGCTCGCGAAGCGTTCAGTGCAGGCGCGTGCCAGTGCCTGAGCGTTCGCGAGCAATACGCCGTGATCCCCAAATCAACCAAGGAATCCGACCC
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| DNA Sequence for Gene |
>PssB64_1926
ATGCAGCAACTCAAACAAAAGCGGGCAGTAATCACCGGAGCAGGCAGTGGCATTGGCGCAGCCATCGCCCGCGCCTATGCGGCTGAAGGCGCGCGTCTGG TGTTGGGCGACCGAGACGCCGACAGCCTGGCGAAGATCGCTGCAGAGTGCCGCCAGCTGGGCGTCCAGGTTCAGGAGTGCGTGGCCGATGTCGGCAGCGT CGACGGCGCGCAAGCCAGCGTCGATGCTTGTGTCGAGCAGTTCGGTGGCATCGACATTCTGGTCAACAACGCGGGCATGCTGACCCAGGCACGTTGCGTG GACCTGACCCTCGATATGTGGAACGACATGCTGCGCATCGACCTGACCAGCGTGTTCGTGGCCAGTCAGCGGGCATTGCCGCACATGATTGCCCAGCGCT GGGGGCGCATCATCAATGTCGCTTCGCAACTGGGTATCAAGGGCGGTGCCGAACTGACCCATTACGCCGCCGCCAAGGCCGGGGTGATCGGTTTCAGCAA GTCCCTGGCGCTGGAAGTCGCCAAGGACAACGTACTGGTCAACGCCATTGCGCCCGGTCCTATCGAAACCCCACTGGTCGCCGGGATCAGCAGCGCCTGG AAAACCGCCAAGGCCGCCGAGTTGCCACTGGGCCGCTTCGGTCTGGCCGAGGAGGTTGCCCCGGTAGCGGTGCTACTGGCCAGCGAGCCGGGTGGCAACC TGTTCGTCGGTCAGACACTGGGCCCCAATTCCGGCGACGTCATGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAACAGCTGGAGAACGCCTGATGTGTGGATTGTGCGGGCTGTTGGGTGAAGACGTGCACTGGAGCGATCCGCTGGCTGCAGAACTGCCCCGGCGGCGT GAGCGCTTGCGGCGTATTGCTGCAATCAACAAGGTGGTCGCGCCGTTTCGTCTGAAGGTCGAAGATTTTCAAGGCGTTTCCTACCTCCTGCTCGGAGCCA CCGGCAAGCAGGAGCTTGCGACCGGGCTGGAGCAGCTCTGGCAGAAAGCCGAGTTGCTGATCGGCCGGCCGCTGGACCCGCTTGATTCAGGTCTGCTCGA TCATCTGCAGAGGTCATCATGAGTATTGCCCTGAACGTAATTACCGGCTTCCTCGGCAGCGGCAAGACCACGCTGCTCAAACGCCTGCTGGCCGATGAAC ACATGGGCGACACCGCGCTGCTGATCAACGAATTCGGCGACGTGGGTATCGATCATCTGCTGGTTGAAGAGGTCGCACCGGATACCGTGCTGCTGCCCAG
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| Amino Acid Sequence |
>3-ketoacyl-(acyl-carrier-protein) reductase
MQQLKQKRAVITGAGSGIGAAIARAYAAEGARLVLGDRDADSLAKIAAECRQLGVQVQECVADVGSVDGAQASVDACVEQFGGIDILVNNAGMLTQARCV DLTLDMWNDMLRIDLTSVFVASQRALPHMIAQRWGRIINVASQLGIKGGAELTHYAAAKAGVIGFSKSLALEVAKDNVLVNAIAPGPIETPLVAGISSAW KTAKAAELPLGRFGLAEEVAPVAVLLASEPGGNLFVGQTLGPNSGDVMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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