Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTACACGGGCGAACCCGTGCCGACCTGTACACCGGAGAGGCCGAGTACGACACCATCGCCCAGATTAAACAGGCCGTGTCGATACCGGTCTTTGCCAATG GCGACATCGATTCACCGCAAAAGGCCCGGCACGTGCTGAAGGCCACCGGTGCAGACGGATTACTGATTGGCAGGGCCGCACAGGGGCGTCCCTGGATTTT TCGCGAGATAGAACACTTCCTGCGGACCGGAGAAACACTGCCGGCGCCGCAGTCGAGTGAAGTGGAACGCATTCTGCTTGAGCATCTGGCAGCGCTCCAC GTTTTCTATGGAGACGTGATGGGCGTGCGCATTGCACGCAAACACGTCAGTTGGTATCTCGCAACCCTGCCGGGCGCCAGAGAGTTTCGCGCCCACTTCA ATCGTTTGGAAGATACGGAAGCACAGTGCGCCAACGTCCGGGAGTTCTTCAGCCAAGGCTGCAAGGGCCCGGATAACGAGAATGATAAAGAGGTGGCCGC
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DNA Sequence for Gene |
>PssB64_1458
|fis
ATGACGATGATGACCGAGACTTTAGTGAGTGGAACAACACCCGTGAGCGACAACGTCAATTTGAAACAGCACCTCAACACGCCGAGCGAAGAGGGTCAGA CCCTGCGCGGAAGTGTCGAGAAGGCGCTGCACAATTATTTCGCCCACCTCGAAGGCGCATCCGTCACTGACGTCTACAACCTGGTGTTGTCGGAGGTCGA GGCTCCGCTTCTGGAAAGCGTGATGAACTACGTCAAGGGCAACCAGACGAAGGCCTCCGAGCTGCTGGGACTGAATCGCGGTACGCTGCGCAAGAAACTC AAACAGTACGATCTGCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCATTCAAAACAGAAAAGGCGACCTTGCACCGCGGTCGCTTTTTTTTGCTGACTTCTTTTGCTTTTGATGGAAATCGAGATGACCGACCAGACTACCCG CCTGCCGATCCGCCGCGCTCTGATCAGCGTATCCGACAAGACAGGAATCCTTGAGTTTGCCCGCGAGCTTGAAGCGCTGGGCGTCGAGATTCTTTCCACT GGCGGTACGTTCAAGCTGCTCAAGGACAACGGCGTCGCGGCAGTCGAAGTGGCCGATTACACCGGCTTCGCTGAAATGATGGACGGCCGGGTCAAGACCC TGCACCCCATGATCCATGGCGGGATTCTGGGTCGTCGCGGCATAGACGACGCCGTCATGACCGAGCACGGCATCAAGCCGATCGATCTGGTTGCGGTCAA TCTGTACCCGTTTGAAGCCACTGTTTCCAAGCCGGGCTGCGACCTGCCGACCGCCGTCGAAAACATCGACATCGGCGGCCCGACCATGGTCCGGTCTGCA
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Amino Acid Sequence |
>Fis family transcriptional regulator
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYNLVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKL KQYDLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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