Pseudomonas syringae pv. syringae B64, PssB64_1349 (rplF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCGCCTGAGCCCGTGTTTTTACTTGCCCGGAAGTTCTCGGCGATCAAGCTGTAGCCGCAAGGCTAATTATTTTGTTTTAGGAGCGTCTAGCCCATGAG TATGCAGGACCCGTTAGCGGACATGCTAACTCGTATCCGTAATGCCCAGATGGCTGAAAAGCCCGTCGTAAGCATGCCATCTTCCACGTTGAAGGTTGCT GTAGCAAAAGTCCTGAAGGACGAAGGCTACATTGCGGGTTATCAGATCAGCAGCGAAGTTAAATCCTCGCTGTCCATCGAGCTTAAGTACTTCGAAGGCC GTCCGGTCATCGAAGAGGTTAAGCGCGTCAGCCGTCCAGGCTTGCGTCAGTACAAGTCCTCCGATGATCTGCCGAAAGTTCGTGGCGGTCTTGGTGTGTC TATCGTCTCCACCAGTAAAGGTGTGATGACGGATCGTGCTGCGCGCGCTGCCGGTGTCGGTGGCGAAGTGCTTTGCACTGTGTTCTAAGGGGGGATAAGC
DNA Sequence for Gene
>PssB64_1349 |rplF
ATGTCACGCGTCGCTAAGAACCCCGTTAAGCTGCCATCCGGCGTCGAAGTCAAACTCGTCGGCCAGCTGCTTTCGGTGAAGGGTGCCAAGGGCACTCTAG AACTGAACATCCATTCGTCCGTTGAGATTGTTGAAGAAGCTGGTGAGCTGCGTTTCGCTGCTCGCAATGGCGATCAACAAACCCGCGCAATGGCAGGCAC CACTCGTGCACTGGTAAACAACATGGTCCAAGGCGTAAGCCAAGGCTTCGAGCGCAAGCTCCAGCTGGTCGGTGTTGGTTACAAGGCGCAAGCAAAAGGC ACGGTACTGAACCTTGCACTTGGCTTCTCGCACCCAGTGGACTACGAATTGCCGAATGGCATCACCGCTGAGACCCCCAGCCAGACCGATATCCTGATTC GCGGTATCGATAAGCAGTTGGTTGGTCAAGTGGCCGCTGAGATCCGCGACTTCCGCCGTCCTGAGCCTTACAAAGGCAAAGGTGTGCGTTACGCAGACGA AGTCGTCCGCCGTAAAGAAGCCAAGAAGAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCATAGCAAATGACCGTCAAAAAAGTTACCCGACTGCGTCGCGCTCGCAAAGCACGCCTGAAAATGCACGAGCTAGAAGTCGTGCGTCTCTGCGTGCAC CGCTCTTCGCAGCACATTTATGCCCAGGTCATCTCGGCCGACGGCAGCAAAGTCCTGGCAAGCGCCTCGACTTTGGACAAAGAACTGCGTGATGGCGCCA CTGGCAACATCGACGCGGCCACTAAGGTTGGCAAGCTGGTCGCCGAGCGCGCGAAAGCCGCGGGTGTATCGCAAGTCGCTTTCGACCGTTCTGGCTTCAA GTACCACGGCCGTGTCAAAGCGCTGGCTGATGCTGCTCGTGAAGGCGGGCTGGAGTTCTAAGTTATGTCAAATCACGACCAAAAACGCGACGAAGGCTAC ATCGAGAAGCTGGTTCAAGTTAACCGCGTGGCCAAAACCGTAAAAGGCGGCCGTATCTTCACTTTCACTGCGTTGACCGTAGTGGGTGATGGTAAAGGGC
Amino Acid Sequence
>50S ribosomal protein L6
MSRVAKNPVKLPSGVEVKLVGQLLSVKGAKGTLELNIHSSVEIVEEAGELRFAARNGDQQTRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKG TVLNLALGFSHPVDYELPNGITAETPSQTDILIRGIDKQLVGQVAAEIRDFRRPEPYKGKGVRYADEVVRRKEAKKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site