Pseudomonas syringae pv. syringae B64, PssB64_1268
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGTGTGTCCTGGTACATCGATTCCCTGTGAGAAGGACGATACAAATTGTATTTAAAATACAAACTGTATTGTCACCAAACGCTACATATCGTATTGTTT GTCTGCACCCCATCTCGGGAGTACTCACATGCAAACCACAGGGAGTCATGGAATGAACGAAATACTGGATCAACTTCGCAAAGAATTCGCCACGCCGTGC CCTTCGCTGAGCGCCGTCAGAGAGCGTTATTTTTCGCACCTGTCGAACGACAGGAATCTGCTGCGCAAGATCAACGCAGGGCGCATCGACTTGAAGGTCA GCCGTACAGGCGGCAGTCGTCAGGGCCACCCCTTCGTGTATCTGCACGACCTGGCCAACTACCTGAGCGCCATCGTGACCAACAGGGCTGCTTGAGGTCA AAAAAGCACCGCGGCAGCGCGATAATGTTCATCGAACTTTGCAGTCATGAAAAATCTTGCTACGTTTCCGGTACAAAATAAAAACAATCGGGATCCTTTC
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| DNA Sequence for Gene |
>PssB64_1268
ATGACCAAGACATCAAGGCGCTGGCCCTTCGCGGCCTGCCTGTTATCGCTTGCCTGCGGCACCGCTGCCGCTGCGCCCTATTCAACCATGGTGGTGTTCG GTGACAGCCTGGCCGATGCCGGGCAGTTTCCTGACACCGCAGGGCCCAGGGGCTCCACGCTCAGGTTCACCAATCGTGTCGGCTCCACTTATCAGGACGG CAGCGGTGAAGCGTTCAATCTGAACTCGTCGACACTGATCGGCAGGATGCTCGGTGTGCCGGCAGGAGATCTGGCGGCCTCGACGTCACCGGTGAATGCT GCACTGGGCGCACCCGATGGCAACAACTGGGCAGTCGGCGGCTACCGGACCGACCAGATTCTTGACTCGATCAACTCGCAATCCACCGTCGTCGATCCGA ACACCGGCACATTGCTACGCAGCCGGACCGGTTACCTGCCCGCCAACAGTTTTCGCGCCGACCCCAACGCTCTTTATTACCTGACCGGGGGCGGCAACGA CTTCCTGCAGGGTCGTGTGTTGAGTGCCGGCAGCGCCGCGCAAGCTGCCAATCAGTTGGCTGACAGCGCGCAAGCCCTGCAACAGGCCGGTGCGCGCTAC ATCATGGTCTGGTTGCTGCCGGATATCGGTAAAACGCCAGCCTTGAGCGGCTCGCCGCTGGCCTCAGCGACTTCCGCACTCAGCGCGGGCTTCAATCAGC AACTGGTCAGCCGACTGGCGCAGATCAATGCCCAGATCATTCCGCTGAATGTTCCGTTGCTGATCAATGAAATCCTCGCTCAACCGGCACGCTTCGGGTT CGATCCCAACGAGAATCTGGTCAGTACTTGTTTCAGCGGCGACAGCTGCCGGGAAAGCACCACCAACGGCAGGTCCAGTGCGACGCCGAATCCGAGCCGG CTGTTCTTCAACGATCGCGTGCACCCGACCGAAGCCGGACAGAGGTTGCTGGCCGACTACGCCTACTCGCTGCTTTCGGCGCCCTGGGAAGTTTCCCTGC TGCCGGAAATGGCCAATGGCACACTGCGCATGCATCAGGACGAAATCCGCGCCCAGTGGCTCAGCGACTGGGGCAACTGGCAAGGCGTCGGGCAGTGGCA GAGCATGCTTTCGGCAGGCGGTCAGAAAATGGACTTCGACGCGCAGGACAGCTCGGCTGACGCTGACGGAAGAGGCTATAACCTGACCATCGGCGGCAGC TATCGATTTGCCGAAAACTGGCGCACAGGGGTTGTCGCCGGGGCATATCGCCAGAGTCTTGAGGCAGGGCCACGGGACTCGGACTACAAACTCAATAGCT ACATCGCCACTGCGTTCCTGCAGTATCAGGCCAACCACTGGTGGGGTGATCTGTCGGTGTCGGGCGGCAAGCTGGACTACGAAAATGCCGAGCGCAAATT CGCGCTGGGCGTCAGCGAAGGTCAGGAAAAAGGCGATACCGACGGCGAAATGTGGGCTGTCAGTGGCCGAGTCGGTTTCGACATCGCGGGCCCGACCAGC CGCTGGCATCTGTCGCCTTTCGTCAGCGCCGATTACGCGCACATCGATGTCGACGGCTACTCGGAAAAAGGCGACCGCTCGACCGCGCTGACCTTCAGTG ACCAGACGCGCAAATCGCGGCGTGCAGGCGTGGGTGTGCAGGGCAAATTCCAAGTGACACCGAGCACACAGGTATGGGGCGAAGTGGCCCATGAAAGGGA GTTCGAGACCGATCAGCAGGAGGTGACCATGGCGCTCAACAGCGTCCAGTCCGTCGGCTTCACGCTGCAAGGCTACACGCCGCAACGCGACCTGAACCGG GCCACGCTGGGTGTCAGCCAGAAGCTGACTCAGGACCTGACACTGCGTGGCAACTACAACTGGCGCAAAAACGACGACGTAACCCAGCAAGGGGTGAATG TTGCGTTGAGTCTGAGTTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAGGCTGCTGGACAGCCTCACTATCGTGCGATGCTCTGCGTCCGCTTTGAGACGCAGAGCAGCAGCCTGCTCAGTCCTCGGCAGTTTGCGAGGCCAGGG CTACGGCGCGGAACATGGCGCGGCGTTTGTTCAGGGTTTCTTCCCACTCCAGCACTGGCACGGAGTCGGCGACAATGCCGCCACCGGCCTGTACATGCAA CTCACCGTCCTTGATCACCGCAGTGCGGATCGCAATCGCCGTGTCCATGTTGCCGTTCCACGCCATATACCCCACCGCGCCGCCGTAGACGCCACGTTTG ACCGGTTCCAGCTCGTCGATGATTTCCATGGCGCGGATCTTCGGCGCCCCGGACAGGGTGCCAGCCGGCAGAATCGCGCGCAGCGCATCCATCGCCGTCA ACCCGCTTTTCAACTGGCCTGTGACGTTGGACACAATGTGCATCACGTTGGAATAACGTTCGATGACCATTTTCTCGGTCAGTTTGACCGTGCCAATCTC
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| Amino Acid Sequence |
>Autotransporting lipase, GDSL family protein
MTKTSRRWPFAACLLSLACGTAAAAPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRVGSTYQDGSGEAFNLNSSTLIGRMLGVPAGDLAASTSPVNA ALGAPDGNNWAVGGYRTDQILDSINSQSTVVDPNTGTLLRSRTGYLPANSFRADPNALYYLTGGGNDFLQGRVLSAGSAAQAANQLADSAQALQQAGARY IMVWLLPDIGKTPALSGSPLASATSALSAGFNQQLVSRLAQINAQIIPLNVPLLINEILAQPARFGFDPNENLVSTCFSGDSCRESTTNGRSSATPNPSR LFFNDRVHPTEAGQRLLADYAYSLLSAPWEVSLLPEMANGTLRMHQDEIRAQWLSDWGNWQGVGQWQSMLSAGGQKMDFDAQDSSADADGRGYNLTIGGS YRFAENWRTGVVAGAYRQSLEAGPRDSDYKLNSYIATAFLQYQANHWWGDLSVSGGKLDYENAERKFALGVSEGQEKGDTDGEMWAVSGRVGFDIAGPTS RWHLSPFVSADYAHIDVDGYSEKGDRSTALTFSDQTRKSRRAGVGVQGKFQVTPSTQVWGEVAHEREFETDQQEVTMALNSVQSVGFTLQGYTPQRDLNR ATLGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSLSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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