Pseudomonas syringae pv. syringae B64, PssB64_0865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGACTTTGTAAACTCGAACGAGCTTGAACTCCTATATTACGGCCAGCAGTTTAAAGATGTCTTAACCAATGTATACAAACAAAAAGAGACTGCAAATAT AGATATTATTATACAGGCTTTAAACTACTACCTAGATAATGACGATTTTTTTGACATAGTCTGACATTGCAGATTCACGGCCTCAAGCCCGCCACTAAGG CGGCGTCAACTAGTTGTTCTTTAACAGTGCATAAAGCAGGTGACTGCCAACTTTGTCTCAGTCACCTGCCACTTTAATCGATAGCTACGCTAAGATATGC GCGACGCACGATAACAACACCCTTCCCTATTATAGCTTGGTCGTCAAACTCAGAAAATCAAAGTTATAAAGCACGAATACGACGGTCGACTACTCAATTC ACCATCGCTATCAGTATGACAGTCTATGCTGTCAAGATCCCAAACAGTCCGAGATCAAAGCCACACCGAACACAAACGCTTTCTCTGGCAAGGCCTGCGG
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| DNA Sequence for Gene |
>PssB64_0865
ATGCTGCGTGAGGAAAGCCCGGGACAGAGCAGCCTGTATATCTACGAGCCCGGCAGCTATGCGCCGCTGGCACGCGTGGATGAAAAAGAAGGCGAGGTAG AGAACAAGGTTTACTACTTCCACACCGACCAGATCGGCACACCGCTGGAAATGACCGACGCCGAAGGGCAGATCGTCTGGCAGGCGAAGTACCGGGCGTG GGGTGCGGTGGAAAAGCTGGTCGTGAACGAGGTTGAGCAGAACCTAAGGTTTCAAGGGCAGTATTTTGATGCCGAGACGGGGCTGCATTACAACACGTTT CGGTATTATGACCCGGAGATTGGGCGGTTTATAACGCAGGATCTGATTGGGTTGGCTGGAGGGTATAACCTGTACCAGTACAATATAAATCCAATTCGCT GGATTGACGTGACGGGTCTAGCCGGATGCACCTTGATAAATGCAGATGCCGTTGATCACGACTACCTTTTAAGGTTAAAACGCTCCGAATATCCCGAAAC CTTTGGTCACATACAAGACACAATCAATGGCGGGCAGCCGTACGTGGTTACCATCCAGAGACATGCAGCAAAATTAAATAGAAAGACAAGCCTCAAAGAC GTTAAAACAATGAAGTCAAAAGATCGCGACGAATGGCCTATGGCCATGTTTAAAGAGGGAGGGAACGGTGCAAATGTTAGACACATCGATCCTAGTGCCC ATCGAGGAGCGGAATCTAGTATTGGTAATGTGCTTTCAGGCCTTCCAAATGGAACTAATATTAAAGTAGAGGTTTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGCAAATTATAATCAAGTAGTGGACTTACTCATATCTCATAGTCAAATTCAAATTCGGGCACGTGCATATGACGAAGCTTCGAGCCAATGGGGCAAGTT AAATATTGATCAAGGTGCTGTAATACATAAAGACTACGTAATATTTGACCCCCTACCAGATGACGCATTTGGTGCAAATATAAGCTTGACTTTAGACACG AAATTTAATTTGCACACACAAACTCAACGCTGCATAGTAGTACCCTTTTTTATTTCAAAAAGAAACGAATTAGAGGTTGCCTCAGCTGCTGAAAAAGCCA AAGTCGTTCTAGATGTCGAAGAGCGCCAATATGCTCTTTACTATGAAGTTTGTGAAGGTGATGAGATTTTTTATAAGTTCACGTTTGTGCCTTCCAATGA TGAGTTTGAAGCAAAATATCTTATGGATGATCCATGGGGTGGGGTAAAGGGGCAGACACTGGTTAAGGGCGTTGCTTAGTTTCCAAGCTATTGGTTTTCT
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| Amino Acid Sequence |
>Rhs family protein
MLREESPGQSSLYIYEPGSYAPLARVDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVEQNLRFQGQYFDAETGLHYNTF RYYDPEIGRFITQDLIGLAGGYNLYQYNINPIRWIDVTGLAGCTLINADAVDHDYLLRLKRSEYPETFGHIQDTINGGQPYVVTIQRHAAKLNRKTSLKD VKTMKSKDRDEWPMAMFKEGGNGANVRHIDPSAHRGAESSIGNVLSGLPNGTNIKVEVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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