Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCCAAGTCGTCGAGACCTGCGTCGACTTCGGCTTCGAACTCGAACCACTTGGCCGGATCGGCAAAAACCTTGAGCGGCTTCATGCGTGCGCGGGCCTGA CCAGCGTTCTGGTACAGGTCTTTCTGTTCCATATAGAACAGTGACCAGCCGCGTTCCTGGGCGGCAAGCAGCATGGCCAGCGAGCTGTCCTTTTTATAGG AAATGCGCTCAATGGGGTCCATGACAATCCCTAGGCGAACGCTCATGGGCAATATCCTCTGATCGGTAAGGGCCGCAACGGCCGTAAAATTGGCATCAGG GTGGCGCTCCGATTGCTCCCGGTCAAGGGGCAGGCCTGCCGCGATGCGCCAAGGTGCACTTTATGGATTGCGTCTGGAGAGTGTGCTAAAAAGGCTCGGC ATCCGGTCTTCGGTCCCAGTCGATCCACGAAGCGATACCGTCGGGCTCCCAGTGCCTCGCAGAATGCGCAAAAATTCGCTGCGGCGATGGAAGAGCAGCT
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DNA Sequence for Gene |
>PssB64_0488
|pilG
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCTCAAGAACGCAGGTTGTGAAG TCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAATCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTA TCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAGTCGACGCCGGTCATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGG ATTGTCGGTTCCGATCAGTTTTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC ACATATCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCCGCGCCTGATGTAGCGCGCTCGTAATCTGACGGGGAACACCCATGGCTCGAATATTGATCGTCGATGACTCGCCGACTGAAATGTACAAACTCACC GGCATGCTGGAAAAGCACGGTCATGAAGTGCTCAAGGCCGAAAACGGCGCTGATGGCGTGGCCCTGGCCCGTCAGGAAAAGCCCGATGCCGTGCTGATGG ACATCGTCATGCCGGGGCTCAACGGCTTTCAGGCCACGCGCCAGCTGACCAAGGATGCCGACACCAGCATGATCCCGGTGATCATGATCACCACCAAGGA TCAGGAGACCGACAAGGTCTGGGGCAAACGCCAAGGCGCGCGGGATTACCTGACCAAGCCGGTGGACGAAGAAACCCTGATGAAAACCTTGAATGCGGTG CTGGCCGGCTGATTGCCGGAATCGCCATGGCCGAGCCGCGCACCGCTTTTGAACTGCTTCTGGATATGGATCGGCGCTGTCGTTCGCTGGCGGCGGGCCT
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Amino Acid Sequence |
>pilus response regulator PilG
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFKSTPVIMLSSKDGLFDKAKGR IVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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