Pseudomonas syringae pv. syringae B64, PssB64_0486
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAACGCATTCTGATGGTCGATGGCGAACCGGTCCCGTATTGCCTGGCGCGCATCCCGGCAGCCGGCGAGACGCGTGGCAACCTGGCGGCCGGTGGACGT GGCGAGGCCCGTCCGTTGAGCGACAAGGACCGCTGGATCGCCGAACAGATCGGCCCGACCCTGCGTGAAAAAGGCCTGCTGTTCGTCGGCCTCGACGTGA TTGGTGAGCACCTGACCGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGACAACGCCTTCGGCACCAACATTGGTGGCCTGCTGATGGACGC GATCGAGAAGAAGCTGCAAGCGCGCAAGGGCTGATCAGCCGCTGACGCCGCTGGCCACGGGCAACACCGTGCGCCACGGCGCCAGATCGATTCCCTTGGT CCGATCCGCAGCAGAGCGGCGCGGCACATTGCGTTATCATGCGCCACCTGTAACACGACACGGATTTTGACATGCAGGCTGACGAGATGCTGAACCGCCA
|
|
| DNA Sequence for Gene |
>PssB64_0486
ATGACATCCATGGCCAACAACGACCTCCCCCTGGAACTCGCCAACGCCGGTGTGCGCCCTGCCGATCGCCTGGGTTTTACCATGATGATTGCGGCGCTGA TTCACCTCGCGGTGATCCTTGGCGTGGGCTTCACCTATGTAAAGCCGGAGCAGATCTCGCAGACGCTGGAAATCACCCTGGCCACCTTCAAAAGCGAAGA AAAGCCCAAACAGGCTGACTTTCTGGCGCAAGACGATCAGCAGGGCAGCGGCACTCTGGACAAGGCCGAAACGCTCAAGACCACTGAACTGGCGCCCTAT CAGGACACCAAGGTCAACAAGGTCACGCCGCCCCCGGCCAGCAAGCCGGTGGTCAAACAGGAAGCACCGAAGACCGCCGTCGCGACCACCGCGCCCAGTC AGCAGAAAACCGTTGCCAAGCGCGATGAGGTCAAGCCCGAGCCCACCACCAAGGCCGCACCGACCTTCGACAGCTCGGAACTGAGCAACGAAATTGCCAG CCTCGAAGCCGAACTGTCGACCGAACAGCAGCTTTACGCCAAGCGCCCGAAGATCCACCGCCTCAATGCGGCCTCGACCATGCGCGACAAAGGTGCCTGG TACAAGGATGACTGGCGCAAGAAGGTCGAGCGGGTCGGAAACCTGAACTATCCTGAGGAAGCACGACGCAAGCAGATCTACGGTAATTTGCGACTTCTTG TGTCAATCAATCGGGACGGCTCGTTGTATGAAGTGCTGGTGCTCGAATCTTCAGGACAGCCTTTGCTGGATCAGGCCGCACAGCGGATCGTGCGTCTGGC GGCGCCTTTTGCGCCGTTCACCGGCGATCTGGCGGATATTGATCGACTGGAGATCATTCGCACCTGGAAATTTGCACGCGGAGACAAGCTGTCAAGCAAC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACTTTTTGCCAGCTGACGCCCGACACCCACACGTGTCAGTTGTCAGCCGGGCAAGGCAACGCCAAACTAGGGCTCATGAAAAAAGTCTCTCCGAGTTATC TCAAGCATCATTTCCTCATCGCCATGCCTCATATGCACGATGAGAACTTTGCTCAGACCTTGACCTACATTGTCGAGCACAACGCCAATGGCGCCATGGG GCTGGTGATCAACCGCCCGCAAAGCCTGACCCTGGCCGATGTGCTCGAACAACTGCGACCGGAACTGCCGGCACCGAGACACTGCCAGGACATCGTCATT CATACCGGCGGGCCGGTGCAGACCGATCGGGGCTTTGTCCTGCATCCCAGCGGCCAGACCTTTCAGGCCACGGTCAATCTTCCGGGCGGGGTTTCCTTGT CGACCTCTCAGGATGTGCTGTTCTCCATCGCCGATGGCTACGGGCCTGATCAAAATGTGATCACTCTGGGCTACGCGGGATGGGATGCCGGTCAACTGGA
|
|
| Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MTSMANNDLPLELANAGVRPADRLGFTMMIAALIHLAVILGVGFTYVKPEQISQTLEITLATFKSEEKPKQADFLAQDDQQGSGTLDKAETLKTTELAPY QDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTVAKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKGAW YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLADIDRLEIIRTWKFARGDKLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|