Pseudomonas syringae pv. syringae B64, PssB64_0268 (ompR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCTCGTCCAGTTCACGCAGATAACGCAGGCGCTCTTCCAGATGGCGCAGTTGCGTGTCATCAAGACTGCCGGTCACTTCCTTGCGGTAGCGGGAAATG AAGGGCACGGTCGAGCCTTCATCCAGTAGTGCTACGGCCGCTGCGACCTGTTGTGGGCGTACGCCGAGTTCTTCGGCGATGCGGCTGTTGATGCTGTCCA TAAAACCACCTGGAGTTGTGAGCAAAAAACTGGGCTATGTACGAATTGCCTTGCCTGGGTATCGTGCGCCAGCATTTATTTTCAGGGCTGGCGAACTGCC ATGAGTACGGCGTTGCCTGACTTCGAGGGCGGCGCATTATACCCAGCGAAGCCGGATTAGGGGATCGGCCGATAAATGGGGTGTTTTTTCGGCGAAAACG CAGGCACAAGTGTCGCCTCCAGTAAAATCTGCTAACAATGCACAAGGTGCGCATCACCGCAGCTACGCCATAATGCGCCCCGAGATCAGAGGAGCATCCG
|
|
| DNA Sequence for Gene |
>PssB64_0268
|ompR
ATGAGCAGCACCGCACAAAATGCCGAAGGCGAAAAAATCCTTATTGTCGATGACGATCCGGGGCTGAGCAGCCTCCTGGAACGTTTTTTCACCAGCAAGG GCTATCGTGCCCGCGCCGTGGCAAATGTGGAGCAAATGGACCGGTTACTGGCCCGTGAGGTGTTCAACCTTGTGGTGCTGGACCTCATGCTGCCCGGCGA AGACGGCCTTTCAGCCTGTCGTCGTCTGCGTGCCGCAAACAATCAGGTGCCGATTATCATGCTGACTGCCAAGGGCGATGAGCTGAGCCGCATCAAGGGG CTCGAACTGGGGGCTGACGATTATCTGGCCAAGCCGTTCAACCCGGACGAGCTGATGGCGCGGGTCAAGGCGGTGTTGCGTCGTCAGGCGGCACCGGTGC CCGGCGCCCCTGGCAGCGAAGACGAGTCGGTCAGTTTCGGTGACTACGTGCTGTCTCTGGCAACCCGCGAGCTCAAGCGCGGTGAAGAAGTGCACATGCT CACCACCGGTGAATTCGCGGTACTGAAAGCGCTGGTCATGCACGCTCGCGAGCCGCTGACCCGCGACAAACTGATGAACCTTGCGCGTGGCCGGGAGTGG GATGCGCTGGAGCGATCCATTGACGTGCAGATTTCCCGCCTGCGTCGCCTGATCGAGCCTGACCCGTCCAAGCCCCGTTATATACAGACGGTCTGGGGCG TAGGTTATGTATTTGTTCCGGACGGTGCCGGAAGTCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAACCCGGTTGTCGGCCCAGAAATCCGTCATTGCTGCCAGTCACGTCGATAATCTTAAAAGGTTTATCGACGTACTGGTTTTTTGCGTTCGTCCATCGGG TCCGGCCCGCGTTCGGCAAACCTGCGAGCCTCGCTCGCCCTGCAAAGTGTATGGCTGCAGTTATGAAGACTCCGCTCTGGTTCCCGCAAAGCTTTTTCTC CCGCACGCTCTGGCTGGTGCTCATCGTCGTGCTGTTTTCCAAGGCCCTGACGCTGGTTTATCTGCTGATGAACGAAGACGTGCTGGTCGACAGGCAATAC AGCCACGGCGTTGCTCTGACCCTGCGCGCGTACTGGGCAGCCGGTGAAAACGATCGCGATGCGATTGCCGAGGCGGCAGGTCTGATTCGGGTGGTGGGCG GTGGCGTGCCGGAAGGCGAGCAGCACTGGCCTTACAGTGAGATCTATCAGCGGCAGATGCAGGCTGAGCTGGGCACCGATACGGAAGTGCGTCTGCGGGT
|
|
| Amino Acid Sequence |
>chemotaxis protein CheY
MSSTAQNAEGEKILIVDDDPGLSSLLERFFTSKGYRARAVANVEQMDRLLAREVFNLVVLDLMLPGEDGLSACRRLRAANNQVPIIMLTAKGDELSRIKG LELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEDESVSFGDYVLSLATRELKRGEEVHMLTTGEFAVLKALVMHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGAGSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|