Pseudomonas syringae pv. syringae B64, PssB64_0011
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCTTCGAGTTGCTTTTGCTCGAAGGGTTCCAGGCCGGGCTGTCGTGGATCACGATTCTCAAGCGGCGGGCGCGTTATCGCGAAGTGCTGCACGGTTTTG ACGTTGAGCGCCTGGCGCAGCTGAGCGATGCCGAAATAGAGGCGCTGATGCTCGATCCGAGCATTATCCGCAACCGCCTCAAGCTCAAGGCCGTGCGCAC CAATGCGCGGGCCTGGCTGGCGCTGGAAGACCCGGTCGCTCTGCTCTGGTCGTTTGTTGGCGGTACCCCGAAGATCAATCACTTCAAGGATCGCAGCGAA GTCCCGGCGATTACCGCCGAGGCCGAAGCGATGAGCAAGGCACTGAAAAAGGCCGGTTTCACCTTTGTCGGCCCGACCATCTGTTACGCCTACATGCAGG CCAGCGGCATGGTCATGGACCACACCGTCGACTGCGATCGGTATGCGATCCTGAGCCGCTGACGGTTACACTACCCGCCTCGAGAATCTGGGAGTCATCT
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| DNA Sequence for Gene |
>PssB64_0011
GTGGATAAGTTCAAAGGCGCCGTAATGGTCGGGGCGTTGCGATTGTTTGCGCTGTTGCCATGGCGCGCTGTGCAGTGGACAGGCACCGCGATTGGCTGGC TGATGTGGAAGCTGCCCAACCGTTCGCGGGAAGTGGCGCGGATCAATCTGTCCAAGTGCTTCCCCGAGTTGAGCGAGCCGGAGCTTGAAAAGCTCGTCGG CCGCAGTCTCATGGACATCGGCAAGACCTTGACCGAAAGCGCCTGTGCGTGGATCTGGCCGGCACAGAAATCGATCGACCTGGTGCGTGAAGTCGAAGGG CTCGATGTGCTCAAGGACGCGCTGGCCTCCGGCAAGGGCGTGGTCGGCATCACCAGTCACCTGGGCAACTGGGAAGTGCTCAATCACTTCTATTGCAGCC AGTGCAAGCCGATCATTTTCTATCGCCCACCCAAGCTGAAAGCCGTGGACGATCTGTTGCGCAAGCAGCGTGTGCAGTTGGGCAACCGGGTGGCGGCGTC GACCAAGGAAGGCATTCTCAGTGTCATCAAGGAAGTGCGCAAAGGCGGCTCGGTGGGCATTCCGGCCGATCCGGAGCCGGCCGAATCAGCCGGCATCTTC GTGCCCTTCTGCGGCACCATGGCCCTGACCAGCAAGTTCGTACCGAACATGCTGGCCGGTGGCAAGGCAGTCGGCGTATTCCTGCACGCCATGCGCCTGC CGGACGGATCGGGTTACAAAGTGGTACTCGAAGCGGCTCCGGAAGCCATGTACAGCACCGACACCGAAACCTCGGCAGCGGCGATGAGCAAAGTGGTCGA GAAATACGTGCGGGCGTACCCGAGCCAGTACATGTGGACCATGAAGCGCTTCAAGAAACGCCCGCCAGGCGAGGCGCGCTGGTACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAAGAACGGACGCGGAGCGTCCGGAACGGCATGCCCACGCTGGAGCATGGGCACGATAGTGTTTCCCTCAACTGGCCGCCGCAATCAACCCGCGTCGTC CCAGCGCCACCTGAGTCCCTTCCGGACTCATTCGTATCAGGTTCACCGGGATGGATTTGGCTGCAGGGGTGTTGCCGTGTTTATCCCGGTTGGCCAGTGG CAGCAGGCCGTTGGTTTCCGGGTAGTACGCGGCGCAGCAACCCTGCGGCACGTCGTAGGGAATGACTTTGAAACCCGCTGCACGCCGCGCCGTGGTCGGG TCGAGCGCCGTCTGAAACTCGATGTAGTCCCCGGCCTTTAGCCCCAGGCGTTCAATGTCCTGCGGGTTGAGCATCACCACCATGCGATCGCCAAAGATGT CCCGATAACGGTCATCGTTGGAATACACCGTGGTGTTGAACTGGTCATGGCTGCGGATCGTCATCAACTGCAAATGCTCGGCGCCCGGCGGCGTGTCGTC
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| Amino Acid Sequence |
>lauroyl acyltransferase
MDKFKGAVMVGALRLFALLPWRAVQWTGTAIGWLMWKLPNRSREVARINLSKCFPELSEPELEKLVGRSLMDIGKTLTESACAWIWPAQKSIDLVREVEG LDVLKDALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDDLLRKQRVQLGNRVAASTKEGILSVIKEVRKGGSVGIPADPEPAESAGIF VPFCGTMALTSKFVPNMLAGGKAVGVFLHAMRLPDGSGYKVVLEAAPEAMYSTDTETSAAAMSKVVEKYVRAYPSQYMWTMKRFKKRPPGEARWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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