Pseudomonas syringae pv. syringae B64, PssB64_0004 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCTTTGAACAGACTTTGAGCGAACTTGTTGAGCTTGAAGGTTTGACCCTGAGCTACTACCGGGGATGGGACAAGGAAAAAGAGCTAAGTACAGTGCTT GCCTCTTCCCTCCACCGCGACCAGCAAATGGGCCACACCCAGGCCGGACCACAGCGAGCTGACCTGCGCCTTAGATTAGGCGCGCACAATGCGGCAGATA TTCTGTCTCGCGGTCAGCAAAAGCTGGTGGTCTGCGCACTGCGTATTGCTCAGGGACATCTGGTCAGCCAGGTCCGTCGAGGCCAGTGTATTTACCTGGT AGATGATTTGCCCTCCGAACTGGATGACAACCATCGACGCGCGCTTTGCCGCTTGCTGGAAGAATTACGCTGCCAGGTTTTTATCACCTGTGTAGATCAA GAATTTTTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGATTGC
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| DNA Sequence for Gene |
>PssB64_0004
|gyrB
ATGAGCGAAAACCAAACGTACGACTCGTCCAGCATTAAGGTGCTGAAAGGACTTGATGCCGTACGCAAGCGTCCCGGAATGTACATCGGTGATACAGACG ATGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTTGATAACTCGATCGACGAAGCATTGGCAGGCCATTGCGACGACATCAGCATCATCATCCACCC AGACGAATCTATCACCGTGCGCGACAACGGCCGCGGTATTCCGGTAGACGTGCATAAAGAAGAAGGCGTATCGGCAGCCGAGGTCATCATGACCGTACTC CACGCTGGCGGTAAGTTTGATGACAACTCCTACAAAGTATCCGGTGGTTTGCACGGTGTAGGTGTCTCTGTGGTTAACGCCCTTTCAGAGCTTCTGTTGC TGACGGTTCGCCGTAGCGGCAAGATCTGGGAACAGACCTATGTTCATGGTGTTCCACAGGAACCGATGAAGATCGTCGGTGAAAGTGACAGCACAGGCAC TCAGATCCACTTCAAGCCTTCAGCTGAAACGTTCAAGAACATCCACTTCAGCTGGGACATTCTGGCCAAGCGGATTCGTGAACTGTCTTTCCTGAACTCC GGTGTAGGCATTGTCCTCAAGGATGAGCGCAGCGGTAAGGAAGAATTGTTCAAATACGAAGGCGGTCTGCGCGCATTCGTTGAGTACCTGAACACCAATA AAACGCCGGTCAACGAAGTGTTCCACTTCAACATCCAGCGTGATGACGGTATCGGTGTCGAGATTGCTCTGCAGTGGAACGACAGCTTCAACGAGAACCT GCTGTGCTTCACCAACAACATTCCGCAGCGTGATGGCGGTACTCACCTGGTGGGTTTCCGTTCTGCGTTGACGCGCAACCTGAACAACTACATCGAGCAG GAAGGTCTGGCCAAGAAGCACAAGGTCGCGACCACCGGCGACGATGCGCGTGAAGGTCTGACGGCGATCATTTCGGTCAAGGTGCCTGATCCGAAGTTCA GCTCGCAGACCAAGGACAAGCTGGTTTCGTCCGAAGTCAAAACGGCTGTCGAACAGGAAATGGGCAAGTACTTCTCCGACTTCCTGTTGGAAAACCCGAA CGAAGCCAAAGCGGTTGTCGGCAAGATGATCGACGCAGCCCGTGCCCGTGAAGCTGCGCGCAAGGCGCGTGAGATGACCCGTCGTAAAGGCGCGCTGGAT ATCGCTGGCTTGCCGGGCAAACTGGCGGACTGCCAGGAAAAAGACCCTGCCCTCTCCGAACTGTACCTGGTGGAAGGGGACTCTGCTGGCGGATCAGCCA AGCAGGGGCGTAACCGTAGAACCCAGGCCATCCTGCCGCTCAAGGGCAAGATCCTGAACGTTGAAAAAGCGCGTTTCGACAAGATGATCTCTTCGCAGGA AGTGGGTACCTTGATCACTGCGCTGGGCTGCGGTATTGGCCGTGAAGAGTACAACATCGACAAGTTGCGTTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGCTCGCACATCCGTACCCTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCCGAACTGATCGAGCGTGGCTACATCTACATCGCTCAGCCGC CGCTGTACAAGGTCAAGAAAGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGAAGAATACATGACCCAGTCGGCCCTTGAAGACGCCAGCCT GCACCTCAGCGAATCGGCACCGGGTATCTCCGGTACTGCGCTGGAGAAGCTGGTCAACGACTTCCGCATGGTCATGAAGACGCTCAAGCGCCTGTCGCGT CTGTACCCACAGGAACTGACCGAGCACTTCGTGTACCTGCCGCCGATTACGCTCGAACAGCTGTCGGATCACGAGGGCATGCAAGCCTGGCTGGCACTGT TCGACGCGCGTCTGCGCACCGGCGAGAAGTCGGGTCTTGTCTACAAGGCCAGCCTGCGTGAAGACCGTGAACGCAACGTCTGGCTGCCAGAGGTCGAACT GATCTCCCACGGCCTGTCGAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTTACCGCTCTGGGCGCGCAGATCAGCACG CTTCTGGAAGAAGGTGCCTACGTGCAACGTGGCGAGCGCAAGAAGCCCGTCAACGAGTTCAAGGAAGCCCTCGCCTGGCTGATGGCCGAAAGCACCAAGC GCCACACCATCCAGCGCTACAAAGGTCTGGGTGAAATGAACCCGGACCAGCTGTGGGAAACCACCATGGACCCGAGTGTGCGCCGCATGCTGAAAGTCAC CATCGAAGACGCCATCGGCGCTGACCAGATCTTCAACACCCTCATGGGTGATGCGGTCGAGCCACGCCGTGACTTTATCGAGAGCAATGCGCTGGCAGTG TCCAATCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGTTGTCGACGGGCAAGTTAATTGTCATGACAAAAAGTGTCCCTACCCCGGCCTAGCGCCGGGGTTTTTTCTTTTGGTTGAAGGCTTTTCACATAGCA CTGGACCGCTTGAAGGCGCGCCAAGCCGTGCACACCGACGAAGCCGGCAGCATCTTCAACGACGCTAATGACTGGGCCACCGAAACGATGGGCAACTCCA AGTACCCTCTGGAGCTGTTCCAGCGCGTTGTCTCAGTGAGCTTGGAAAACCCCAAAATCGTTAACTCACTCCCGGCACTGGATATTGCTTAAAAGTCACT GCCGCTCGATTTAAAGCACTGATAAGGATTTCAAGATGCAACCGAGCAAAACAACAGTTACAGGCCTGTTCAACAGTCCACACCAATATCAGATTCCCAT TTTTCAACGGGGATATGACTTCGATCAGCAGTGGCCCCTTTGTCGACACCCCCGCGTGTAGAGGGTGAACACGTTATTGGCAAACGATCTCGACTAGGTC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVGESDSTGTQIHFKPSAETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQSALEDASLHLSESAPGISGTALEKLVNDFRMVMKTLKRLSR LYPQELTEHFVYLPPITLEQLSDHEGMQAWLALFDARLRTGEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVTALGAQIST LLEEGAYVQRGERKKPVNEFKEALAWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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