Pseudomonas plecoglossicida NB2011, L321_24621

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold85, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCTCGTTCGCCCGACGCGGCGACGACACCGGCCAGGCATCGCTGGCCAAGGCCGTCGACGCCTCGCTGCAGGTACTGGCCAACCGCATCAGTGCCTGCC ACTTGCAGTTGCACAGCCAGTTCGACGACCATCAACTGGCCATCGACCAGACGCGCCTGGAGCAGATCCTGGTCAACCTGATCGGCAATGCCCTCGATGC CATGACCACCCAGCCGCTGCCCGAGCTATGGCTGGAAGGCGAGCTGCAAGGCGACAAGTACCGCCTGCTGGTACGCGACAATGGCCACGGCATCGACGCC GAAGCACGCAAGCACCTGTTCGAACCTTTCTTCACCACCAAACCCGGCGAACACGGCCTGGGCCTGGGCCTGACCCTGTCGGCGAGCCTCGCCGCCGCCG CCAAGGGCAGCCTGAACGTCGAGCATCCCGCCAGTGGCGGCACCGCCTTCGTGCTTGCCCTGCCTCTGGTCACGCCCCCTAGCGAAACGGCAGAGCATCC
DNA Sequence for Gene
>L321_24621
ATGAACCCAGCACCCCTTACCGTCCTGATCGTCGAAGACGACCCGCATGTGCTGCTCGGCTGCCAGCAAGCCCTGGCACTCGAAGACATCGCCTGCGAAG GGGTCGGCAGCGCCGAGCAAGCCCTGGAGCGCATCGGTGACGACTTTGCTGGCATCGTCGTCAGCGATATTCGCCTGCCAGGCATCGACGGCCTGGAGCT GCTCAACCGCCTCAAGGCCCGCGACCGCAGCTTGCCGGTGGTGCTGATCACCGGCCACGGCGATATCGACATGGCCGTCGGCGCCATGCGCAACGGCGCC TACGACTTCATGGAAAAACCCTTCTCGCCCGAACGCCTGGTCGACGTGGTCAGGCGCGCCCTGGAACAGCGCGGACTGTCGCGCGAGGTGTTCGCCCTGC GCCGCCAGCTCGCCGAGCAGAGCAGCCTGGAGGGGCGCATCATTGGCCGCTCGCCGGCAATGGAACAGTTGCGCGAACTGATCGCCAACGTGGCCGACAC GTCGGCCAACGTACTGATCGAAGGCGAAACCGGGACAGGCAAGGAGCTGGTCGCGCGATGCCTGCACGATTTCAGCCGTCGCCAGGGCCAGCCTTTCGTG GCGCTGAACTGCGGTGGGTTGCCGGAGAACCTGTTCGAGAGCGAGATTTTCGGCCACGAGGCCAATGCCTTTACCGGGGCAGGCAAGCGCCGCATCGGCA AGATCGAGCATGCCAACGGCGGCACCCTGTTCCTCGACGAAGTCGAGAGCATGCCGATCAACTTGCAGATCAAGCTGCTGCGCGTCCTTCAGGAGCGCAC CCTGGAGCGCCTGGGCTCGAACCAGAGCATCCCGGTGGACTGCCGGGTGATCGCCGCGACCAAGGCCGACCTGGCCACCCTGGGCCAGAGCGGCCAGTTC CGCAGTGACCTCTACTACCGCTTGAACGTGGTCACCCTCGAATTGCCCCCCCTGCGTGAACGGCGCGAAGACATTCGCCAGCTGTTCGAGCACTTCCTGC AGCAGTCGGCACTGCGCTTCGACCGGGAACTGCCGCAGCTGGACAGCCAGACCCTGTCCCGGCTGATGTCCCACGACTGGCCGGGCAACGTGCGCGAGCT GCGCAACGTCGCCGAACGTTTCGCCCTGGGCCTGCCTGCCTTCAAGAAGGGCCCGACCGGCGGCGCCAGCCAGGGGCTGGGTTTTGCCGAGGCGGTCGAG GCCTTCGAGCGCAATCTGCTCGGCGACGCCCTGCAACGTACCGGCGGCAATCTCAGCCAGGCCAGCCAGGAACTGGGCATGGCCAAGACCACGCTGTTCG ACAAGGTGAAAAAGTACGGGCTTGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATCGGCAAGGGAAGCGTTGCTCGCTAGCTGAAAGCTGACGCAACTCCTGTGGGAGCCGGCTTGCCGGCGATAGCGCAGGCCTTTCGATCTGAGCCCCTG CAGGCCGGCGATATGCGTCACGTTCTGTCGGTGTGATTGCAGGTACGGCAACACCGCCCCGAGCAATGGCGCCTTGAACGGCTCCTGGAAGCGGTGCGCC AACCCCGGAATCAGGCGCAGCTCGCTGCCGCGGATATGCGCCGCCAGGTGCACGCCATGCATGACCGGCAACAACGGATCGGCCGTGCCATGCACCACCA GGGTTGGCACCCGCAGTCGATCGAGCAGCGCCACCCTGCTCGGCTCGGCCAGGATCGCCATGATCTGGCGCTTGGCCCCTTCGGGATTGAACGCTCGATC ATAGGCCGCTGCAGCCTGCTGCAACAGCACTGCCCGATCGTCTCGCACCTGCGGGCTACCGAGCGCCGCCAACAGGTCGGCCTGCTGCTCGATGGCGACC
Amino Acid Sequence
>Fis family two component sigma-54 specific transcriptional regulator
MNPAPLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGA YDFMEKPFSPERLVDVVRRALEQRGLSREVFALRRQLAEQSSLEGRIIGRSPAMEQLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRQGQPFV ALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLATLGQSGQF RSDLYYRLNVVTLELPPLRERREDIRQLFEHFLQQSALRFDRELPQLDSQTLSRLMSHDWPGNVRELRNVAERFALGLPAFKKGPTGGASQGLGFAEAVE AFERNLLGDALQRTGGNLSQASQELGMAKTTLFDKVKKYGLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site