Pseudomonas plecoglossicida NB2011, L321_24241

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold85, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGCCGGCAATAACGCCGCGTCGGTACAGTTGGTGCTGGAGGACGGCAGCCTGTTCACCCAGGAAGGTCGCCTGGAGTTCTCGGAAGTCGCGGTCGACGA GACCACCGGTTCCGTGACCCTGCGCGCCATCTTCCCGAACCCCGATCACACCCTGCTGCCAGGCATGTTCGTGCATGCGCGGCTCAAGGCCGGGGTCAAC AGCAATGCCATCCTGGCGCCGCAGCAAGGCGTGACCCGTGACCTCAAGGGCGCCCCTACCGCGCTGGTGGTCAACCAGGCGAACAAGGTCGAACTGCGCC AGCTCAAGGCCAGCCGCACCCTGGGCAGCGATTGGCTGATCGAGGAAGGCCTGAACCCGGGCGACCGCCTGATCACCGAAGGCCTGCAGTACGTACGCCC AGGTGTCGAGGTCACGGTCAGCGATGCGACCAACGTCAAGAAGCCGGCCGGCCCTGATCAGGCCAGCGCGGCCAAAGCAGACGCCAAAGCGGAGTAAACC
DNA Sequence for Gene
>L321_24241
ATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGATCATGCTGGTCGGCGCCTTGTCGATCCTGAAGCTGCCGGTCAACC AGTACCCCAGCATCGCGCCACCGGCCATCGCCATCTCCGTGACCTACCCGGGCGCCTCGGCGCAGACCGTGCAGGACACCGTGGTGCAGGTCATCGAGCA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCTTCGGAGAGCAACTCCGACGGCAGCATGACCATTACCGCCACCTTCGAGCAGGGCACCAACCCT GATACCGCGCAGGTCCAGGTGCAGAACAAGCTGAACCTGGCCACCCCGCTGCTGCCGCAGGAAGTGCAGCAGCAAGGTATCCGCGTCACCAAGGCAGTGA AGAACTTCCTGCTGGTGATCGGTCTGGTGTCCGAAGACGGCAGCATGACCAAGGACGACCTGGCGAACTACATCGTTTCCAACATGCAGGACCCGATCTC GCGTACCGCCGGTGTCGGTGACTTCCAGGTGTTCGGTGCACAGTACGCCATGCGTATCTGGCTCGATCCGGCCAAGCTGAACAAGTTCCAGCTGACCCCG GTCGACGTCAAGACCGCCGTTGCCGCGCAGAACGTCCAGGTATCCTCCGGCCAGCTCGGCGGCCTGCCTGCCCTGCCCGGTACCCAGCTCAACGCCACCA TCATCGGCAAGACCCGTCTGCAGACCGCCGAGCAGTTCGAGAAGATCCTGCTCAAGGTCAACAAGGATGGCTCGCAAGTACGCCTGAGTGATGTCGCCCA GGTTGGCCTGGGTGGCGAGAACTACGCCGTCAGCGCCCAGTTCAACGGCAAGCCGGCCTCGGGCCTGGCAGTCAAGCTGGCCACCGGCGCCAACGCCCTC GACACGGCCAGGGCCCTGCGCAAGACCGTCTCCGACCTGGAGCCGTTCTTCCCGCCGGGCGTGAAAGCAGTGTTCCCGTATGACACCACGCCAGTGGTCA CCGAATCGATCAGCGGGGTGATCCACACCCTGATCGAAGCCGTGGTCCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAGAACTTCCGTGCCACCGTCAT CACCACCATGACCGTTCCGGTGGTATTGCTCGGCACCTTCGGCATCCTCGCCGCCGCAGGCTTCAGCATCAACACCCTGACCATGTTCGCCATGGTTCTG GCCATCGGCTTGCTGGTGGACGATGCCATCGTCGTGGTGGAGAACGTCGAGCGGGTCATGTCCGAGGAAGGCTTGCCGCCCAAGGAGGCGACCAAGCGTT CCATGGAGCAGATCCAGGGAGCGCTGGTGGGTATCGCCCTGGTGCTGTCGGCGGTACTGCTGCCCATGGCCTTCTTCGGCGGCTCCACCGGTGTGATCTA CCGCCAGTTCTCCATCACCATCGTCTCGGCCATGGGCCTGTCGGTGCTGGTGGCCCTGATCTTCACCCCGGCGCTGTGCGCCACCATGCTCAAGCCGCTG AAGAAGGGCGAGCACCATGTGGCCAAGCGCGGCTTCTTTGGCTGGTTCAACCGCAACTTCGACCGCAGCGTGGAAGGCTACGAGCGCAGCGTCGGCACCA TCCTGCGCAACAAGCTGCCGTTCCTGCTCGCCTACGCCCTGATCGTGGTCGGCATGATCTGGCTGTTCGCCCGTATCCCCACCGCGTTCCTGCCCGAGGA AGACCAGGGCGTACTGTTCGCCCAGGTACAGACCCCGGCCGGCTCCAGTGCCGAGCGCACCCAGGTGGTGGTCGACCAGATGCGCGAGTACCTGCTCAAG GAAGAAGGCGATACCGTTGCCTCGGTGTTCACCGTCAACGGCTTCAACTTCGCCGGTCGTGGCCAGAGCTCGGGCATGGCGTTCATCATGCTCAAGCCAT GGGACGAGCGCTCCAAGGAGAACAGCGTGTTCGCCCTGGCCCAGCGTGCCCAGCAGCATTTCTTCACCTTCCGCGATGCGATGGTGTTCGCCTTCGCCCC GCCTGCGGTACTCGAACTGGGTAACGCCACCGGCTTCGACGTGTTCCTCCAGGACCGTGGCGGTGTCGGCCATGAAAAACTCATGGAAGCGCGCAACCAG TTCCTGGCCAAGGCCGCGCAGAGCAAGGTGCTCAGTGCCGTGCGCCCGAACGGCCTGAACGATGAGCCGCAGTACCAGCTGACCATCGATGACGAGCGTG CCAGCGCCCTGGGCGTGACCATCGCCGACATCAACAACACCCTGTCGATTGCCCTCGGTGCCAGCTACGTCAACGACTTCATCGACCGCGGTCGGGTCAA GAAGGTGTACATCCAGGGCGAGCCGAATTCGCGGATGAGCCCGGAAGACCTGCAGAAGTGGTACGTGCGCAACGGTAAAGGCGAGATGGTGCCGTTCTCC TCCTTCGCCAAGGGCGAGTGGAGCTACGGATCGCCGAAGCTGTCGCGCTACAACGGCGTCGAGGCGATGGAAATCCTCGGTGCACCGGCCCCGGGCTACA GCACCGGTGAAGCCATGGCCGAGGTGGAGCGCATCGCTGGCGAGCTGCCTGACGGCATCGGCTTCTCCTGGACCGGCATGTCCTACGAGGAAAAACTCTC CGGCTCGCAGATGCCTGCGCTGTTCGCCCTGTCGGTACTGTTCGTGTTCCTCTGCCTGGCAGCCCTGTACGAAAGCTGGTCGATCCCGATCGCGGTCGTG CTGGTGGTGCCACTGGGTATCATCGGTGCACTGGTCGCCACCAGCCTGCGCGGGTTGTCCAACGACGTGTACTTCCTGGTCGGCCTGTTGACCACCATCG GCCTGGCGGCGAAGAACGCGATCCTGATCGTCGAATTCGCCAAGGAACTGCACGAGCAGGGCCGCAGCCTGTATGACGCAGCGATCGAAGCGTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCGCTGGCGTTCATCCTCGGCGTGGTACCGTTGACCATCGCCAGCGGCGCGGGCGCCGGCAGCCAGCACGCCATC GGCACCGGTGTGATCGGCGGCATGATCAGCGCCACCGTGCTGGCGATCTTCTGGGTACCGCTATTCTTCGTCGCAGTGTCGTCGCTGTTCGGCAGCAAAG AGCCGGAAGCACACGCCACCCCTGAAACTCCACGTTATGAGGCTGGGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAGTCCTTGCTGTCCCTGGCGGTAACCGCTTTCATCCTGGGCGGCTGCTCGCTGATACCCGACTACCAGACTCCGGAGTCGCCGGTGGCTGCGCAGTG GCCGCAAGGCCCTGCGTACTCGCCGGCCCAGTCGGCCGACGTGGCCGCCGCCGAACAAGGCTGGCGCCAGTTCTTCCACGACCCGGCGCTGCAGCAGCTG ATCCAGACCTCGCTGGTCAACAACCGCGACCTGCGCGTCGCGGCGTTGAACCTCGAAGCCTACCGTGCCCAGTACCGCATCCAGCGGGCCGACCTGTTCC CGGCCGTTTCGGCCGATGGCAGCGGCAGCCGTCAACGGGTCCCGGCGAACATGTCGCAGACCGGCGAATCCGGCATCACCAGCCAGTATTCGGCCACTTT GGGCGTCAGTGCCTATGAGCTGGACCTGTTCGGCCGGGTGCGCAGCCTGACCGAGCAAGCCCTGGAAACCTACCTGTCCAGCGAGCAGGCGCGCCGCTCC
Amino Acid Sequence
>hydrophobe/amphiphile efflux-1 (HAE1) family protein
MSKFFIDRPIFAWVIALVIMLVGALSILKLPVNQYPSIAPPAIAISVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNKFQLTP VDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRLQTAEQFEKILLKVNKDGSQVRLSDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL DTARALRKTVSDLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQNFRATVITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVL AIGLLVDDAIVVVENVERVMSEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLSVLVALIFTPALCATMLKPL KKGEHHVAKRGFFGWFNRNFDRSVEGYERSVGTILRNKLPFLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLK EEGDTVASVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDAMVFAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQ FLAKAAQSKVLSAVRPNGLNDEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPNSRMSPEDLQKWYVRNGKGEMVPFS SFAKGEWSYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPDGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVV LVVPLGIIGALVATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAI GTGVIGGMISATVLAIFWVPLFFVAVSSLFGSKEPEAHATPETPRYEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site